Gene Information

Name : basR (ECNA114_4295)
Accession : YP_006141415.1
Strain : Escherichia coli NA114
Genome accession: NC_017644
Putative virulence/resistance : Virulence
Product : Transcriptional regulatory protein BasR/pmrA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4436876 - 4437544 bp
Length : 669 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAATTCTGATTGTTGAAGACGATACGCTGTTATTGCAGGGATTGATTCTGGCGGCGCAAACCGAAGGCTACGCGTG
CGATGGCGTGAGCACCGCGCGGATGGCGGAACAAAGCCTTGAAGCCGGTCATTACAGCCTGGTGGTACTGGATTTAGGCT
TACCCGATGAAGATGGGCTGCATTTTCTTGCCCGTATCCGGCAGAAAAAATACACTCTGCCGGTGTTAATTCTCACCGCC
CGCGATACCCTTACCGACAAAATCGCCGGGCTGGATGTCGGGGCCGACGATTATCTGGTGAAGCCTTTTGCGCTGGAAGA
GTTGCACGCCCGTATCCGCGCCCTGCTACGACGCCATAATAATCAGGGCGAAAGTGAGCTGATTGTTGGCAACCTGACGC
TGAATATGGGTCGCCGTCAGGTCTGGATGGGCGGTGAAGAGTTGATTCTGACGCCCAAAGAATATGCTCTGCTGTCGCGC
CTGATGCTTAAAGCAGGCAGCCCGGTGCATCGGGAAATTCTCTACAACGATATCTACAACTGGGACAACGAGCCCTCGAC
CAACACCCTGGAAGTGCATATCCATAACCTGCGCGACAAAGTGGGCAAAGCCCGTATCCGCACCGTGCGCGGATTTGGCT
ATATGCTGGTCGCAAATGAGGAAAACTAA

Protein sequence : 
MKILIVEDDTLLLQGLILAAQTEGYACDGVSTARMAEQSLEAGHYSLVVLDLGLPDEDGLHFLARIRQKKYTLPVLILTA
RDTLTDKIAGLDVGADDYLVKPFALEELHARIRALLRRHNNQGESELIVGNLTLNMGRRQVWMGGEELILTPKEYALLSR
LMLKAGSPVHREILYNDIYNWDNEPSTNTLEVHIHNLRDKVGKARIRTVRGFGYMLVANEEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-29 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
basR YP_006141415.1 Transcriptional regulatory protein BasR/pmrA BAC0487 Protein 7e-55 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
basR YP_006141415.1 Transcriptional regulatory protein BasR/pmrA VFG0473 Protein 4e-86 92