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Name : kspC (ECNA114_3032) Accession : YP_006140145.1 Strain : Escherichia coli NA114 Genome accession: NC_017644 Putative virulence/resistance : Virulence Product : Capsular polysaccharide export system protein Function : - COG functional category : - COG ID : - EC number : - Position : 3107884 - 3109911 bp Length : 2028 bp Strand : + Note : - DNA sequence : ATGATTGGCATTTACTCGCCTGGCATCTGGCGTATTCCGCATCTGGAGAAATTTCTGGCGCAACCGTGCCAGAAACTTTC TCTGCTGCGCCCTGTTCCACAAGAAGTTGATGCTATCGCCGTGTGGGGACATCGTCCCAGCGCGGCGAAACCAGTCGCCA TCGCCAAAGCAGCGGGAAAACCCGTCATTCGTCTGGAAGATGGATTTGTGCGTTCGCTGGATCTTGGCGTCAATGGCGAG CCGCCGCTTTCTCTGGTGGTGGATGATTGTTGCATTTACTACGATGCCAGCAAGCCTTCAGCACTGGAGAAACTGGTACA AGATAAAGCCGGAAATACAGCTCTGATAAGCCAGGCCAGAGAAGCGATGCACACCATCGTGACCGGGGATTTGTCGAAAT ATAACCTGGCACCTGCGTTTGTGGCTGATGAGTCAGAACGTTCAGACATCGTTCTGGTTGTCGATCAGACATTTAATGAT ATGTCAGTGACGTATGGCAATGCTGGCCCGCATGAGTTTGCTGCCATGCTGGAAGCCGCGATGGCGGAAAATCCTCAAGC CGAAATTTGGGTGAAGGTGCATCCGGATGTCCTGGAAGGAAAGAAAACAGGTTATTTCGCCGCTCTGCGCGCCACGCAAC GAGTACGTTTAATTGCCGAGAATGTCAGCCCGCAGTCGCTGTTGCGACACGTTTCCCGGGTTTACGTCGTGACCTCCCAG TACGGCTTTGAAGCCTTGCTGGCAGGAAAACCGGTGACATGCTTCGGCCAGCCCTGGTATGCAGGCTGGGGCTTAACCGA CGATCGCCATCCGCAGTCCGCTTTGTTATCTGCCCGACGCGGTTCTGCCACGCTGGAGGAACTTTTTGCCGCTGCATACC TGCGTTACTGTCGCTATATCGATCCGCAAACGGGAGAAGTAAGCAATCTATTTACCGTGCTGCAATGGCTGCAATTACAA CGTCGACATCTGCAACAGCGTAATGGTTATTTATGGGCGCCAGGCTTAACGCTGTGGAAGTCAGCGATCCTGAAACCTTT CTTGCAAACGGCAACAAACCGGCTGAGTTTTTCACGTCGCTGTACTGCGGCGAGCGCCTGCGTGGTATGGGGTGTAAAGG GAGAACAGCAATGGCGAGCCGAAGCGCAGCGAAAATCACTGCCGTTATGGCGAATGGAAGATGGTTTTCTACGTTCATCC GGACTTGGCTCTGACCTTTTGCCGCCGCTATCGTTGGTCCTGGATAAACGCGGGATCTACTATGACGCCACGCGCCCCAG CGACCTGGAAGTGCTGCTTAATCACAGCCAGTTAACACTGGCGCAGCAGATGCGAGCTGAAAAATTACGCCAGCGACTGG TTGAAAGCAAACTGAGCAAATACAACCTGGGGGCCGATTTCTCTCTGCCTGCCGAGGCCAAAGATAAAAAAATCATCCTG GTGCCGGGTCAGGTAGAAGACGATGCCTCAATTAAAACAGGCACTGTGTCGATTAAGAGCAACCTTGAGTTATTACGCAC AGTACGCGAGCGCACTCCGCACGCTTACATTATTTATAAACCGCACCCGGATGTACTGGTGGGGAATCGCAAGGGCAATA TTCCGACAGAACTAATTGCTGAACTCGCTGATTATCAGGCACTGGACGCAGATATTATTCAATGCATTCAGCGCGCAGAT GAAGTGCACACCATGACATCATTGTCCGGGTTTGAAGCGTTATTACATGGCAAGCAAGTTCATTGTTACGGCCTGCCCTT CTATGCCGGTTGGGGTTTAACCGTTGATGAACATCACTGCCCGCGTCGCGAGCAAAAATTAACGATAGCAGATTTGATCT ATCAGGCGTTGATTGTTTATCCAACCTATATCCACCCAACACTGCTACAACCTATTACGGTTGAAGAGGCGGCGGAATAT TTGATCCAGACGCCGCGCAAGCCGATGTTTATTACCCGAAAAAAAGCGGGACGAGTAATACGCTATTACCGCAAATTAAT TATGTTCTGCAAGGTCAGATTTGGCTAA Protein sequence : MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQEVDAIAVWGHRPSAAKPVAIAKAAGKPVIRLEDGFVRSLDLGVNGE PPLSLVVDDCCIYYDASKPSALEKLVQDKAGNTALISQAREAMHTIVTGDLSKYNLAPAFVADESERSDIVLVVDQTFND MSVTYGNAGPHEFAAMLEAAMAENPQAEIWVKVHPDVLEGKKTGYFAALRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ YGFEALLAGKPVTCFGQPWYAGWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYIDPQTGEVSNLFTVLQWLQLQ RRHLQQRNGYLWAPGLTLWKSAILKPFLQTATNRLSFSRRCTAASACVVWGVKGEQQWRAEAQRKSLPLWRMEDGFLRSS GLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAEAKDKKIIL VPGQVEDDASIKTGTVSIKSNLELLRTVRERTPHAYIIYKPHPDVLVGNRKGNIPTELIAELADYQALDADIIQCIQRAD EVHTMTSLSGFEALLHGKQVHCYGLPFYAGWGLTVDEHHCPRREQKLTIADLIYQALIVYPTYIHPTLLQPITVEEAAEY LIQTPRKPMFITRKKAGRVIRYYRKLIMFCKVRFG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsC | YP_854335.1 | capsule polysaccharide export protein KpsC | Not tested | PAI I APEC-O1 | Protein | 0.0 | 97 |
| kpsC | AAZ04470.1 | capsule polysaccharide export protein | Virulence | PAI I APEC-O1 | Protein | 0.0 | 97 |
| lipA | NP_273145.1 | capsule polysaccharide modification protein | Not tested | IHT-A | Protein | 9e-126 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| kspC | YP_006140145.1 | Capsular polysaccharide export system protein | VFG0259 | Protein | 4e-126 | 50 |
| kspC | YP_006140145.1 | Capsular polysaccharide export system protein | VFG0692 | Protein | 2e-116 | 47 |
| kspC | YP_006140145.1 | Capsular polysaccharide export system protein | VFG0704 | Protein | 5e-104 | 47 |
