Gene Information

Name : ECNA114_2860 (ECNA114_2860)
Accession : YP_006139970.1
Strain : Escherichia coli NA114
Genome accession: NC_017644
Putative virulence/resistance : Virulence
Product : Clp ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2919786 - 2922422 bp
Length : 2637 bp
Strand : +
Note : -

DNA sequence :
ATGACCGGAAATCACCCCGCCGCGCTGCTGCGTCGCCTTAACCCATACTGTGCACGGGCGCTGGACGCTGCCGCCTCACT
GTGTCAGACCCGCGCCCATGCGGAAATAACCATTGAACACTGGCTGCTGAAACTGCTGGAGCAGGGAGAAGGCGATATCA
CGGTGATTGCCCGCCGCTATGAATGGGATATCGACACGCTCTGGCAGTCTCTGCTGGCACATCTGGACACCTTACCCCGC
CCGGTCCGCGAACGTCCTCAACTTTCTGAACCGCTGGCAGCGCTTATCCGACAGGCGTGGCTGATAGCGTCACTGGAAGG
CGACGATCCACAAATCCGCAGCCAGCATCTGCTGATGGCGCTGACAGAAAAACCGATGCTGCCCGCCTGTAATGACCTGT
GGGTATTGCTGAGCCTGAGCCGTGTGCAGCTTGAGCGGCTGCGTCCCCTGCTGGATGCGCAGTCGGATGAATGTCCGGCA
CGTCAGCCACAGGTCACCGAACCGCTGACATCCGCGCAACCCGGGGCGGCAACGACGGACGCACCGGCAAAAACGCTGAC
GGGGAAACAGGATGACGCCCTGCTGGCGGTGCTTAACCGCTTTACCGAAGACGTGACGGAAAAAGCCCGCAGCGGGCGAA
TCGACCCGGTATTCGGGCGCGACACGGAAATTCGCCAGATGGTCGATATCCTCTCCCGTCGCCGCAAAAACAACCCGATT
CTGGTGGGAGAACCGGGGGTGGGCAAAACCGCGCTGGTGGAAGGGCTGGCGCTGCGTATCACCGAAGGCAACGTGCCGGA
CAGCCTGAAAACGGTGCATATCCGCACACTGGACCTCGGTCTGTTACAGGCTGGCGCGGGCGTTAAAGGTGAATTTGAAC
AGCGGCTGAAAAATGTCATCGATGCAGTGCAGAAATCACCGGAGCCGGTACTGCTGTTTATTGATGAAGCCCATACCATT
ATCGGTGCGGGTAATCAGGCAGGCGGCGCGGATGCGGCGAACCTGCTGAAACCGGCGCTGGCAAGGGGCGAACTGCGCAC
CATCGCGGCGACCACGTGGAGCGAATACAAACAGTATTTTGAGCGCGACGCCGCGCTGGAACGCCGCTTCCAGATGGTGA
AAGTCGACGAGCCGGATGATGACACCGCCTGCCTGATGCTGCGGGGACTCAAGGCCCGCTATGCACAGCACCACGGCGTA
CATATGCTGGACAGCGCCATTCAGACCGCCGTGCGCCTGTCGCGCCGCTATCTGACCGGACGCCAGTTGCCGGACAAAGC
GGTTGATTTGCTGGATACCGCCGGGGCAAGAGTCCGCATGAGCCTTGACACTCTGCCGGAGCCGTTGACGCAGCTTCATG
CGCGACTGGCGGCGCTGGATATCGAGCGGGAGGCGATTGAGCAGGACAGCGTGTTTTATCCCGAAACCAGCCCGGAGCGG
CTGGCGGAACTGACCGATTTGCGTGATGAGCTACAGGCAGAAGCCGGGCATCTGGAAGCGCAGTATCAGCAGGAAAAGGC
ACTGGCGCAGCAGATTATGACGTTGCGTCAGGAAGGAACAGACAGCTCTGAACTGCAACAGCAACTGCGGACGCATCAGG
GCTTTGCACCGCTGCTGGCGCTGGATGTGGACGCCCGCGCCGTCGCCACGGTGGTGGCGGACTGGACCGGCATCCCGCTC
TCTTCCCTGCTCAGGGACGAGCAGAGCGACCTGCTCAGTATGGAACAGAGTCTTGAAAACCGCGTTGTCGGGCAAAGCCC
GGCGCTCTGCGCCATCGCACAGCGGCTGCGGGCGGCTAAAACCGGCCTCACGCCGGAGAACGGCCCACAGGGGGTATTCC
TGCTGACCGGCCCCAGCGGCACCGGCAAAACCGAAACTGCGCTCACACTGGCCGACACCCTGTTTGGTGGTGAAAAATCC
CTTATCACCATTAATCTTTCGGAATACCAGGAACCGCATACCGTTTCCCAGTTGAAAGGCTCGCCTCCAGGCTACGTTGG
TTACGGTCAGGGTGGCGTACTTACCGAAGCCGTTCGCAAACGCCCTTACAGCGTGGTGCTGCTCGACGAAGTGGAAAAGG
CGCATCGCGACGTGATGAACCTGTTCTATCAGGTGTTCGACCGGGGCTTTATGCGCGACGGCGAAGGGCGGGTAATCGAC
TTCCGCAACACCGTCATTCTGATGACCGCCAATCTGGGCAGCGACCACATCATGCAACTGCTGGAGGAAAAACCGGACGC
CACGGACGCAGACCTGCATGAACTGCTGTATCCCCTTCTGCGAGACCATTTTCAGCCTGCACTGATGGCGCGTTTTCAGA
CGGTGATTTACCGCCCGCTGGGACAGGAGGCGATGCGCACCATTGTGGAAATGAAACTGGCGCAGGTGGTCCGCCGTCTT
CACCAGCACTACGGACTGGAAACGGAAATCAACGACAGCCTGTATGACCAGCTTACCGCCGCCTGCCTGCTGCCGGATAC
CGGGGCGCGCAATATCGACAGCCTCCTGAACCAGCAAATCCTGCCGGTCTTAAGCCAGCAGTTGCTGGCACAGCAGGCCG
TGCATCATAAGCCTGCCCGACTGCGGCTTGGCTGGGATGAGGAGGACGGGATTGTACTGGAATTTGATGAGAAATAA

Protein sequence :
MTGNHPAALLRRLNPYCARALDAAASLCQTRAHAEITIEHWLLKLLEQGEGDITVIARRYEWDIDTLWQSLLAHLDTLPR
PVRERPQLSEPLAALIRQAWLIASLEGDDPQIRSQHLLMALTEKPMLPACNDLWVLLSLSRVQLERLRPLLDAQSDECPA
RQPQVTEPLTSAQPGAATTDAPAKTLTGKQDDALLAVLNRFTEDVTEKARSGRIDPVFGRDTEIRQMVDILSRRRKNNPI
LVGEPGVGKTALVEGLALRITEGNVPDSLKTVHIRTLDLGLLQAGAGVKGEFEQRLKNVIDAVQKSPEPVLLFIDEAHTI
IGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQMVKVDEPDDDTACLMLRGLKARYAQHHGV
HMLDSAIQTAVRLSRRYLTGRQLPDKAVDLLDTAGARVRMSLDTLPEPLTQLHARLAALDIEREAIEQDSVFYPETSPER
LAELTDLRDELQAEAGHLEAQYQQEKALAQQIMTLRQEGTDSSELQQQLRTHQGFAPLLALDVDARAVATVVADWTGIPL
SSLLRDEQSDLLSMEQSLENRVVGQSPALCAIAQRLRAAKTGLTPENGPQGVFLLTGPSGTGKTETALTLADTLFGGEKS
LITINLSEYQEPHTVSQLKGSPPGYVGYGQGGVLTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGFMRDGEGRVID
FRNTVILMTANLGSDHIMQLLEEKPDATDADLHELLYPLLRDHFQPALMARFQTVIYRPLGQEAMRTIVEMKLAQVVRRL
HQHYGLETEINDSLYDQLTAACLLPDTGARNIDSLLNQQILPVLSQQLLAQQAVHHKPARLRLGWDEEDGIVLEFDEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 3e-143 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECNA114_2860 YP_006139970.1 Clp ATPase VFG2076 Protein 1e-151 44
ECNA114_2860 YP_006139970.1 Clp ATPase VFG2084 Protein 2e-133 43