Gene Information

Name : ECNA114_2551 (ECNA114_2551)
Accession : YP_006139660.1
Strain : Escherichia coli NA114
Genome accession: NC_017644
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2596848 - 2597474 bp
Length : 627 bp
Strand : -
Note : -

DNA sequence :
ATGAAAGAGCTGGGGCTGGTCAGCTGTCAGCAGCCGACTTACCGGTATAAACGTGGTGGTCATGAACATGTTGCTATCCC
TAACTACCTTGAACGGCAGTTCGCCGTGACCGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTATATCTGGACGGGTA
AGCGCTGGGCGTACCTCGCCGTTGTTCTCGACCTGTTCGCAAGAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGGAC
AGCAGGCTTACCATGAAAGCACTGGAAATGGCATGGGAAACCCGTGGTAAGCCCGTCGGGGTGATGTTCCACAGCGATCA
AGGCAGTCATTATACGAGCAGGCAGTTCCGGCAGTTACTGTGGAGATACCGGATCAGGCAGAGTATGAGTCGGCGTGGAA
ACTGCTGGGATAACAGCCCAATGGAGCGCTTCTTCAGGAGTCTGAAGAACGAATGGGTGCCGGCGACGGGCTATGTAAGC
TTCAGCGATGCAGCTCACGCAATAACGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAATGGTGG
GTTACCACCAAACGAATCAGAAAACCGATACTGGAAAAACTCTAACGCGGAGGCCAGTTTTAGTTGA

Protein sequence :
MKELGLVSCQQPTYRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPD
SRLTMKALEMAWETRGKPVGVMFHSDQGSHYTSRQFRQLLWRYRIRQSMSRRGNCWDNSPMERFFRSLKNEWVPATGYVS
FSDAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKNSNAEASFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 4e-88 89
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 4e-88 89
orfB AGK06993.1 IS1359 transposase; OrfB Not tested SGI1 Protein 6e-77 72
orfB AGK07051.1 IS1359 transposase; OrfB Not tested SGI1 Protein 6e-77 72
orfB ACX47958.1 IS1359 transposase; OrfB Not tested SGI1 Protein 6e-77 72
VC1789 NP_231424.1 transposase OrfAB subunit B Not tested VPI-2 Protein 9e-77 72
VPI2_0008c ACA01825.1 transposase OrfAB subunit B Not tested VPI-2 Protein 6e-77 72
orfB YP_001217329.1 transposase OrfAB subunit B Not tested VPI-2 Protein 9e-77 72
orfB AGK06910.1 IS1359 transposase; OrfB Not tested SGI1 Protein 6e-77 72
overlap with orfA characteristic of IS3 family members AGK06947.1 IS1359 transposase; OrfB Not tested SGI1 Protein 6e-77 72
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 3e-63 64
unnamed AAC31485.1 L0006 Not tested LEE Protein 2e-63 64
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 1e-63 64
Z5089 NP_290241.1 transposase Not tested LEE Protein 2e-63 64
unnamed CAI43898.1 putative transposase Not tested LEE Protein 3e-63 63
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 3e-63 63
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 2e-63 63
tnpB CAB61574.1 transposase B Not tested HPI Protein 9e-33 46
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 6e-32 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECNA114_2551 YP_006139660.1 putative transposase VFG1484 Protein 2e-88 89
ECNA114_2551 YP_006139660.1 putative transposase VFG1122 Protein 3e-77 72
ECNA114_2551 YP_006139660.1 putative transposase VFG0785 Protein 6e-64 64