Gene Information

Name : fliP1 (ECNA114_0213)
Accession : YP_006137309.1
Strain : Escherichia coli NA114
Genome accession: NC_017644
Putative virulence/resistance : Virulence
Product : Flagellar biosynthesis protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 242966 - 243718 bp
Length : 753 bp
Strand : -
Note : -

DNA sequence : 
ATGAAACGCCGCACTCAACTGACGCTGGGCCTGGCGCTGCTGGCGCTCGCCCCGCTGGCGCTGGCCCAGGGCGGCGATAT
CGCACTGCTTAACGTGGTCACCCACGGCAACACTCAGGAGTACAGCGTCAAAATTCAGGTACTGATTCTGATGACCCTCG
TCGGTTTGCTGCCGACGATGGTGCTGATGATGACCTGTTTCACGCGTTTTATTATCGTGCTGTCACTGCTGCGCCAGGCG
CTGGGGCTGCAACAAACGCCGCCAAACCGCATTCTGATTGGTATTGCGCTCTCACTCACCCTGCTGGTAATGCGCCCCAT
CTGGCTCAATATTTACGACCACGCGGTAGTGCCGTTCGAAAACGATCAGATTACCCTGACCGATGCGTTAAGCACCGCCG
CGACGCCGCTAAAACGCTTTATGCTGGCGCAGACCGACAAAAAAGCGATGGCGCAAATCATGACCATCGGCGGCGCGAAG
GGCAATGCCGCCGACCAGGATCTCTCCATCGTGGTGCCCGCCTATGTACTGAGCGAGCTGAAAACCGCCTTCCAGATTGG
CTTTATGATTTACATCCCGTTTCTGGTTATCGACCTGATTGTCGCCAGCGTATTGATGGCGATGGGGATGATGATGCTGT
CGCCGCTGATTGTTTCGCTACCCTTTAAACTGATGCTGTTTGTGCTGATTGACGGCTGGTCGCTGACCATCGGCACGCTC
ACCACCAGCATTCGCGGGCTGGGGCTGGGCTGA

Protein sequence : 
MKRRTQLTLGLALLALAPLALAQGGDIALLNVVTHGNTQEYSVKIQVLILMTLVGLLPTMVLMMTCFTRFIIVLSLLRQA
LGLQQTPPNRILIGIALSLTLLVMRPIWLNIYDHAVVPFENDQITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIGGAK
GNAADQDLSIVVPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFVLIDGWSLTIGTL
TTSIRGLGLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 2e-23 43
hrcR NP_791222.3 type III secretion protein HrcR Virulence Hrp PAI Protein 5e-24 42
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 9e-28 42
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 9e-28 42
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 9e-28 42
hrcR AAG33884.1 HrcR Virulence Hrp PAI Protein 4e-24 42
hrpW AAB05075.1 HrpW Virulence Hrp PAI Protein 8e-23 42
hrcR ABQ88359.1 HrcR Virulence Hrp PAI Protein 8e-23 42
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 1e-23 42
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 4e-30 41
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 5e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP1 YP_006137309.1 Flagellar biosynthesis protein VFG1259 Protein 2e-57 56
fliP1 YP_006137309.1 Flagellar biosynthesis protein VFG2016 Protein 8e-54 53
fliP1 YP_006137309.1 Flagellar biosynthesis protein VFG2494 Protein 7e-51 51
fliP1 YP_006137309.1 Flagellar biosynthesis protein VFG2338 Protein 2e-47 49