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Name : fimD1 (ECNA114_1595) Accession : YP_006138694.1 Strain : Escherichia coli NA114 Genome accession: NC_017644 Putative virulence/resistance : Virulence Product : Outer membrane usher protein Function : - COG functional category : - COG ID : - EC number : - Position : 1604648 - 1607263 bp Length : 2616 bp Strand : - Note : - DNA sequence : ATGCATCAGGTGTTAATACTGCCTCGCTTTGCACGGCTTACCTTTGCCCTTGGCTTAGCAACTGCGGTTTTTCCCGTTGA CGCAGAGTATTATTTTAATCCACGGTTTTTAAGCAATGACCTTGCTGAATCTGTCGATTTATCTGCCTTTACTAAGGGAC GCGAGGCCCCACCTGGTACATATCGGGTCGACATTTATTTGAACGACGAATTTATGGCTAGTCGGGATATTACTTTTATT GCAGATGATAATAACGCAGATCTCATCCCATGCCTGAGTACAGACCTTCTTGTCAGTCTTGGCATAAAAAAATCAGCATT ATTAGACAACAAGGAACATTCGGCAGATAAACATGTGCCGGACAACAGCGCATGCACACCACTTCAGGATCGTTTGGCTG ACGCATCATCTGAGTTTGATGTTGGTCAGCAACATCTGTCACTCTCCGTTCCGCAAATATATGTCGGCAGAATGGCTCGC GGCTATGTTTCTCCTGATCTGTGGGAAGAAGGAATAAATGCCGGGCTACTAAACTATAGTTTTAATGGTAATTCTATTAA TAACCGTAGTAACCATAATGCAGGAAAATCCAACTATGCATATTTGAATTTACAGAGTGGCATCAACATTGGTAGTTGGC GACTGCGCGATAACTCAACGTGGAGTTATAACAGTGGGAGTAGCAATTCATCTGACAGCAATAAATGGCAGCATATCAAT ACGTCGGCTGAACGTGACATTATTCCGTTACGCTCACGGTTAACAGTGGGTGATAGTTATACCGATGGCGATATTTTTGA CAGTGTGAACTTTCGTGGCCTTAAAATAAATTCAACAGAAGCGATGTTGCCCGATAGCCAACATGGTTTCGCTCCGGTGA TTCATGGTATTGCTCGTGGCACCGCACAAGTGAGTGTAAAACAGAATGGATACGATGTTTATCAGACTACTGTCCCACCC GGCCCTTTTACTATTGATGATATCAACTCTGCGGCCAATGGTGGTGATCTGCAAGTAACCATAAAAGAGGCAGACGGCAG TATTCAGACATTATATGTTCCTTATTCGTCTGTTCCGGTTCTCCAACGTGCTGGATATACGCGTTATGCACTTGCCATGG GGGAATATCGTAGTGGGAATAACCTGCAAAGCTCCCCCAAGTTCGTACAAGCAAGCTTGATGCATGGTCTGAAAGGAAAC TGGACACCTTATGGCGGAATGCAAATTGCAGAAGATTATCAGGCCTTCAACCTTGGTATTGGTAAAGATTTAGGACTTTT TGGTGCCTTTTCTTTCGATATCACGCAGGCCAATACGACGCTTGCAGATGACACCCGTCACAGCGGACAATCGGTTAAAT CCGTCTACAGCAAATCCTTCTACCAGACGGGAACCAATATCCAGGTCGCAGGATATCGCTATTCTACGCAAGGTTTTTAT AACTTATCCGACAGTGCATACAGTCGAATGAGTGGTTACACCGTCAAGCCTCCTACCGGAGACACCAGTGAGCAGACACT ATTTATTGATTATTTTAATCTGTTCTACAGTAAGCGTGGTCAGGAACAAATAAGCATCTCTCAGCAGCTTGGACATTACG GTACGACATTTTTCAGTGCCAGTCGCCAAAGTTACTGGAACACGTCACGCAGCGACCAGCAAATATCATTTGGATTAAAT GTGCCGTTTGGTGATATTACGACTTCGCTGAATTACAGCTATTCCAATAATATATGGCAAAACGATCGGGATCATTTACT CGCTTTTACACTTAATGTTCCCTTTAGTCATTGGATGCGTACAGACAGTCAGTCGGCATTTCGTAATTCAAACGCCAGTT ACAGTATGTCAAACGATTTGAAAGGCGGCATGACCAACCTATCAGGGGTTTATGGCACTCTGCTGCCGGATAATAACCTG AATTATAGCGTTCAGGTCGGTAACACCCAAGGGGGTAATACATCGTCTGGCACCAGTGGTTACAGTTCTCTTAATTATCG TGGAGCTTACGGTAATACGAATGTCGGTTACAGTCGGAGTGGTGACAGCAGCCAGATTTATTACGGAATGAGTGGTGGGA TTATTGCTCATGCTGATGGCATCACCTTTGGACAGCCGCTGGGCGACACAATGGTTCTGGTTAAGGCTCCTGGCGCTGAT AATGTCAAAATAGAGAACCAGACCGGAATTCATACCGACTGGCGTGGCTATGCCATATTACCATTTGCGACAGAATATAG AGAAAATCGTGTCGCTCTTAACGCGAATTCCCTTGCAGATAATGTTGAACTGGATGAAACCGTAGTCACTGTCATCCCAA CTCACGGTGCTATTGCCAGAGCAACATTTAATGCACAAATCGGCGGGAAAGTATTAATGACGTTGAAGTACGGTAATAAA AGCGTTCCATTCGGTGCAATTGTCACTCACGGAGAGAATAAAAATGGCAGCATTGTCGCGGAAAATGGTCAGGTTTATCT GACTGGACTTCCACAGTCAGGGAAATTACAGGTTTCATGGGGCAATGATAAAAACTCAAACTGTATTGTCGATTACAAGC TTCCTGCAGTCTCTCCTGGAACCTTGCTGAACCAGCAGACAGCAATCTGTCGCTAA Protein sequence : MHQVLILPRFARLTFALGLATAVFPVDAEYYFNPRFLSNDLAESVDLSAFTKGREAPPGTYRVDIYLNDEFMASRDITFI ADDNNADLIPCLSTDLLVSLGIKKSALLDNKEHSADKHVPDNSACTPLQDRLADASSEFDVGQQHLSLSVPQIYVGRMAR GYVSPDLWEEGINAGLLNYSFNGNSINNRSNHNAGKSNYAYLNLQSGINIGSWRLRDNSTWSYNSGSSNSSDSNKWQHIN TSAERDIIPLRSRLTVGDSYTDGDIFDSVNFRGLKINSTEAMLPDSQHGFAPVIHGIARGTAQVSVKQNGYDVYQTTVPP GPFTIDDINSAANGGDLQVTIKEADGSIQTLYVPYSSVPVLQRAGYTRYALAMGEYRSGNNLQSSPKFVQASLMHGLKGN WTPYGGMQIAEDYQAFNLGIGKDLGLFGAFSFDITQANTTLADDTRHSGQSVKSVYSKSFYQTGTNIQVAGYRYSTQGFY NLSDSAYSRMSGYTVKPPTGDTSEQTLFIDYFNLFYSKRGQEQISISQQLGHYGTTFFSASRQSYWNTSRSDQQISFGLN VPFGDITTSLNYSYSNNIWQNDRDHLLAFTLNVPFSHWMRTDSQSAFRNSNASYSMSNDLKGGMTNLSGVYGTLLPDNNL NYSVQVGNTQGGNTSSGTSGYSSLNYRGAYGNTNVGYSRSGDSSQIYYGMSGGIIAHADGITFGQPLGDTMVLVKAPGAD NVKIENQTGIHTDWRGYAILPFATEYRENRVALNANSLADNVELDETVVTVIPTHGAIARATFNAQIGGKVLMTLKYGNK SVPFGAIVTHGENKNGSIVAENGQVYLTGLPQSGKLQVSWGNDKNSNCIVDYKLPAVSPGTLLNQQTAICR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 0.0 | 57 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 0.0 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fimD1 | YP_006138694.1 | Outer membrane usher protein | VFG0876 | Protein | 0.0 | 59 |
| fimD1 | YP_006138694.1 | Outer membrane usher protein | VFG1645 | Protein | 0.0 | 54 |
| fimD1 | YP_006138694.1 | Outer membrane usher protein | VFG0912 | Protein | 0.0 | 54 |
| fimD1 | YP_006138694.1 | Outer membrane usher protein | VFG0446 | Protein | 2e-158 | 44 |
