Gene Information

Name : sitA (ECNA114_1304)
Accession : YP_006138403.1
Strain : Escherichia coli NA114
Genome accession: NC_017644
Putative virulence/resistance : Virulence
Product : Iron ABC transporter substrate binding component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1315006 - 1315797 bp
Length : 792 bp
Strand : -
Note : -

DNA sequence : 
ATGGCCAAAAACGTGGCGGGAGATGCTGCAGAAGTCTCATCCATAACCAAGCCTGGTGCAGAAATTCATGAGTATCAGCC
TACCCCTGGCGATATTAAACGTGCGCAGGGGGCACAACTGATTCTCGCCAATGGTATGAATCTGGAATTGTGGTTCCAAC
GCTTTTACCAGCATCTCAATGGGGTTCCAGAAGTAATTGTCTCTTCGGGTGTGACGCCTGTAGGGATCACCGAAGGACCC
TATGAGGGCAAACCTAACCCCCATGCATGGATGTCGCCAGATAATGCTCTGATTTACGTCGATAATATTCGTGATGCGTT
GATAAAATACGATCCGGCAAATGCACAAACCTACCAACGCAATGCCGATACTTATAAAGCCAAGATTACCCAAACCCTTG
CCCCCCTGCGTAAGCAGATTACGGAACTCCCTGAGAATCAGCGATGGATGGTCACCAGTGAAGGGGCTTTTTCTTATCTC
GCACGCGATTTGGGGCTAAAAGAGCTTTATCTGTGGCCGATTAATGCCGATCAACAAGGAACACCGCAGCAGGTACGTAA
GGTTGTTGATATAGTTAAGAAAAATCATATCCCGGCAGTCTTTAGCGAGAGTACGATTTCCGATAAACCAGCGCGTCAGG
TTGCGCGTGAAACCGGCGCACACTACGGCGGTGTGCTCTATGTCGATTCCCTGAGCACAGAAAACGGCCCGGTACCGACG
TATATCGACCTTCTTAAGGTTACTACCAGTACGCTGGTACAGGGAATTAAAGCTGGGAAAAGGGAGAAATAA

Protein sequence : 
MAKNVAGDAAEVSSITKPGAEIHEYQPTPGDIKRAQGAQLILANGMNLELWFQRFYQHLNGVPEVIVSSGVTPVGITEGP
YEGKPNPHAWMSPDNALIYVDNIRDALIKYDPANAQTYQRNADTYKAKITQTLAPLRKQITELPENQRWMVTSEGAFSYL
ARDLGLKELYLWPINADQQGTPQQVRKVVDIVKKNHIPAVFSESTISDKPARQVARETGAHYGGVLYVDSLSTENGPVPT
YIDLLKVTTSTLVQGIKAGKREK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-103 80
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 1e-103 80
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 1e-103 80
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 1e-103 80
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 9e-104 80

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitA YP_006138403.1 Iron ABC transporter substrate binding component BAC0349 Protein 5e-104 80
sitA YP_006138403.1 Iron ABC transporter substrate binding component BAC0439 Protein 3e-84 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitA YP_006138403.1 Iron ABC transporter substrate binding component VFG0525 Protein 5e-104 80