Gene Information

Name : ecpD (ECNA114_0129)
Accession : YP_006137225.1
Strain : Escherichia coli NA114
Genome accession: NC_017644
Putative virulence/resistance : Virulence
Product : Putative chaperone protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 145640 - 146380 bp
Length : 741 bp
Strand : -
Note : -

DNA sequence : 
ATGTTTTTCAACACTAAATATACAGCAGCATTATGCTTCGCAACCTGTGTAGCTTTTAGCTCGTCAGCTATAGCAGATAT
CGTAATTTCCGGTACACGCGTAATCTATAAAAGCGACCAAAAAAGTGTCAACATTCGCCTGGAAAATAAAGGCAATAACC
CATTACTTGTTCAGAGTTGGCTGGATACTGGTGATGACAATGCTGAGCCTGGCAGTATTACCGTCCCCTTTACTGCGACT
CCGCCCGTATCACGCATTGATGCAAAACGCGGCCAAACCATCAAACTGATGTACACCGCCAGCAGCGTCCTGCCAAAAGA
CAGAGAAAGTGTGTTCTGGTTTAACGTACTAGAAGTTCCTCCAAAACCAGATGCCGCAACAGTTGCAAATCAAAGCCTGC
TGCAATTGGCATTTCGCACACGTATAAAACTGTTCTATCGCCCGGAAGCATTGAAGGGGAATCCCTCAGAAGCACCATTA
GCCCTGAAATGGTCCTGGTCAGGTTCCGAGGGTAAAGCAGCATTACGAGTGGCCAATCCAACCCCTTACTACGTCTCTTT
TAGCAGTGGTGATTTAGAAGCCAGCGGTAAACGCTTTCCGATTGATGTGAAAATGATTGCACCATTCAGTGATGAAGTCA
TGAAAGTCACTGGCCTTAATGGCAAAGCAAATTCTGCAAAAGTGCATTTTTACGCCATTAATGATTTTGGTGGTGCCATT
GAAGGTAATGCCAGTCTGTAA

Protein sequence : 
MFFNTKYTAALCFATCVAFSSSAIADIVISGTRVIYKSDQKSVNIRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTAT
PPVSRIDAKRGQTIKLMYTASSVLPKDRESVFWFNVLEVPPKPDAATVANQSLLQLAFRTRIKLFYRPEALKGNPSEAPL
ALKWSWSGSEGKAALRVANPTPYYVSFSSGDLEASGKRFPIDVKMIAPFSDEVMKVTGLNGKANSAKVHFYAINDFGGAI
EGNASL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ecpD1 AAO49832.1 pilin chaperone ecpD1 Not tested SPI-3 Protein 4e-63 59
unnamed CAD33727.1 putative F17-like fimbrial chaperone Virulence PAI I 536 Protein 1e-41 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ecpD YP_006137225.1 Putative chaperone protein VFG1468 Protein 7e-42 44
ecpD YP_006137225.1 Putative chaperone protein VFG1145 Protein 3e-39 42