Gene Information

Name : kdsB (ECNA114_1004)
Accession : YP_006138101.1
Strain : Escherichia coli NA114
Genome accession: NC_017644
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.38
Position : 1037360 - 1038106 bp
Length : 747 bp
Strand : +
Note : -

DNA sequence :
ATGAGTTTTGTGGTCATTATTCCCGCGCGTTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAA
ACCCATGATTGTTCATGTTCTTGAACGCGCGCGCGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATG
TTGCCCGCGCTGTTGAAGCCGCTGGCGGCGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGTACAGAACGTTTGGCG
GAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGAC
AATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGG
AAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGATGCCGAAGGGTACGCACTGTACTTCTCTCGCGCCACCATT
CCGTGGGATCGTGATCGTTTTGCAAAAGACCTTGAAACCGTTGGCGATAACTTCCTGCGTCATCTTGGTATTTATGGCTA
CCGAGCAGGCTTTATCCGTCGTTATGTTACCTGGCAGCCAAGTCCGTTAGAACATATCGAAATGTTAGAGCAGCTTCGTG
TTCTGTGGTATGGCGAAAAAATCCACGTTGCTGTCGCCCAGGAAGTTCCTGGCACAGGTGTGGATACCCCTGAAGATCTC
GAGCGCGTTCGCGCTGAAATGCGCTAA

Protein sequence :
MSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESGAERIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLA
EVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATI
PWDRDRFAKDLETVGDNFLRHLGIYGYRAGFIRRYVTWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDL
ERVRAEMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 2e-34 45
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 5e-34 45
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 2e-34 45