Gene Information

Name : hlyD (UMNK88_pHly52)
Accession : YP_006137087.1
Strain :
Genome accession: NC_017643
Putative virulence/resistance : Virulence
Product : hemolysin secretion protein HlyD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 56301 - 57737 bp
Length : 1437 bp
Strand : +
Note : -

DNA sequence :
ATGAAAACATGGTTAATGGGGTTCAGCGAGTTCCTGTTGCGCTATAAACTTGTCTGGAGTGAAACATGGAAAATCCGGAA
GCAATTAGATACTCCGGTACGTGAAAAGGACGAAAATGAATTCTTACCCGCTCATCTGGAATTAATTGAAACGCCAGTAT
CCAGACGGCCGCGTCTGGTTGCTTATTTTATTATGGGGTTTCTGGTTATTGCTTTTATTTTATCTGTTTTAGGCCAAGTG
GAAATTGTTGCCACTGCAAATGGGAAATTAACACACAGTGGGCGTAGTAAAGAAATTAAACCTATTGAAAACTCAATAGT
TAAAGAAATTATCGTAAAAGAAGGAGAGTCAGTCCGGAAAGGGGATGTGTTATTAAAGCTTACAGCACTGGGAGCTGAAG
CTGATACGTTAAAAACACAGTCATCACTGTTACAGGCCAGGCTGGAACAAATTCGGTATCAAATTCTGAGCAGGTCAATT
GAATTAAATAAACTACCTGAACTAAAGCTTCCTGATGAGCCTTATTTTCAGAATGTATCTGAAGAGGAAGTACTGCGTTT
AACTTCTTTGATAAAAGAACAGTTTTCCACATGGCAAAATCAGAAGTATCAAAAAGAACTGAATCTGGATAAGAAAAGAG
CAGAGCGATTAACAGTACTTGCCCGTATAAACCGTTATGAAAATTTATCAAGGGTTGAAAAAAGCCGTCTGGATGATTTC
AGTAGTTTATTGCATAAACAGGCAATTGCAAAACATGCTGTACTTGAGCAGGAGAATAAATACGTCGAAGCAGTAAATGA
ATTACGAGTTTATAAATCACAACTGGAACAAATTGAGAGTGAGATATTGTCTGCAAAAGAAGAATATCAGCTTGTTACGC
AGCTTTTTAAAAATGAAATTTTAGATAAGCTAAGACAAACAACAGACAACATTGGGTTATTAACTCTGGAATTAGCGAAA
AATGAAGAGCGTCAACAGGCTTCAGTAATCAGGGCCCCAGTTTCGGGAAAAGTTCAGCAACTGAAGGTTCATACTGAAGG
TGGGGTTGTTACAACAGCGGAAACACTGATGGTCATCGTTCCGGAAGATGACACGCTGGAGGTTACTGCTCTGGTACAAA
ATAAAGATATTGGTTTTATTAACGTCGGGCAGAATGCCATCATTAAAGTGGAGGCATTTCCTTATACACGATATGGTTAT
CTGGTGGGTAAGGTGAAAAATATAAATTTAGATGCAATAGAAGACCAGAGACTGGGACTTGTTTTTAATGTTATTATTTC
TATTGAAGAGAATGGTTTGTCAACCGGGAATAAAAACATTCCATTAAGCTCGGGTATGGCAGTCACTGCAGAAATAAAGA
CAGGTATGCGAAGTGTAATCAGTTATCTTCTTAGTCCTTTAGAAGAGTCAGTAACAGAAAGTTTACGTGAGCGTTAA

Protein sequence :
MKTWLMGFSEFLLRYKLVWSETWKIRKQLDTPVREKDENEFLPAHLELIETPVSRRPRLVAYFIMGFLVIAFILSVLGQV
EIVATANGKLTHSGRSKEIKPIENSIVKEIIVKEGESVRKGDVLLKLTALGAEADTLKTQSSLLQARLEQIRYQILSRSI
ELNKLPELKLPDEPYFQNVSEEEVLRLTSLIKEQFSTWQNQKYQKELNLDKKRAERLTVLARINRYENLSRVEKSRLDDF
SSLLHKQAIAKHAVLEQENKYVEAVNELRVYKSQLEQIESEILSAKEEYQLVTQLFKNEILDKLRQTTDNIGLLTLELAK
NEERQQASVIRAPVSGKVQQLKVHTEGGVVTTAETLMVIVPEDDTLEVTALVQNKDIGFINVGQNAIIKVEAFPYTRYGY
LVGKVKNINLDAIEDQRLGLVFNVIISIEENGLSTGNKNIPLSSGMAVTAEIKTGMRSVISYLLSPLEESVTESLRER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyD CAD42037.1 HlyD protein Virulence PAI II 536 Protein 0.0 98
hlyD CAD33761.1 Hemolysin D Virulence PAI I 536 Protein 0.0 98
hlyD NP_755449.1 hemolysin D Virulence PAI I CFT073 Protein 0.0 97
hlyD AAC61717.1 chromosomal hemolysin D Virulence PAI I CFT073 Protein 0.0 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hlyD YP_006137087.1 hemolysin secretion protein HlyD VFG1502 Protein 0.0 98
hlyD YP_006137087.1 hemolysin secretion protein HlyD VFG1556 Protein 0.0 98
hlyD YP_006137087.1 hemolysin secretion protein HlyD VFG0908 Protein 0.0 97
hlyD YP_006137087.1 hemolysin secretion protein HlyD VFG0843 Protein 3e-125 57