Gene Information

Name : pilT (UMNK88_pIncI177)
Accession : YP_006137023.1
Strain :
Genome accession: NC_017642
Putative virulence/resistance : Virulence
Product : IncI1 conjugal transfer lytic transglycosylase PilT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 76949 - 77509 bp
Length : 561 bp
Strand : -
Note : -

DNA sequence : 
ATGTCCGGGGGTAAAGTGCCCCTCAGACTTATTTCATTAATCCTGCTTTGTTCTCTTATTTATCCCGCCCGAGCTTCATA
CATCGCCCCCAAACAAATCTGGACTAACAAGTGGGACAATTGCTTTGCCGCCGCCGGCGCACGCTATCAAATTGAACCAT
TATTGTTGAAGGCCATTTCTGCCGGGGAATCTTCATTGAAGCCGGGCGCAATTAACATAAATAAGGACAGAAAAACAGGC
AAAGCCAGTAGTACGGATTATGGGTTGATGCAAATAAACTCAACCCATATTCCAAAGCTTATAAAGATGGGCGTAATCAA
AAAGTCTGAGGATTTAATTACCAAACCATGTCTTAATATCCATATAGGAAGCTGGATACTGGCAAGACATTTTCAGATAT
GTGGCGTCAGCTGGAATTGCCTTGGATCATACAATGCCGGATTCCGTAAGGACAGACATGAAACAAGAGAGCAATATGCT
AATAAAGTATGGAGAATTTATCGTGACATGAAAGGGATATGCCTTCCCGGGCAGGGAGGCAGACAATGCAGACAATCGTA
G

Protein sequence : 
MSGGKVPLRLISLILLCSLIYPARASYIAPKQIWTNKWDNCFAAAGARYQIEPLLLKAISAGESSLKPGAININKDRKTG
KASSTDYGLMQINSTHIPKLIKMGVIKKSEDLITKPCLNIHIGSWILARHFQICGVSWNCLGSYNAGFRKDRHETREQYA
NKVWRIYRDMKGICLPGQGGRQCRQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pilT NP_458636.1 putative membrane protein Virulence SPI-7 Protein 2e-44 66
pilT NP_807847.1 hypothetical protein Virulence SPI-7 Protein 2e-44 66
pilT AAC98888.1 PilT Virulence SPI-7 Protein 1e-44 66
iagB YP_217796.1 cell invasion protein Virulence SPI-1 Protein 1e-21 42
iagB NP_461798.1 invasion protein precursor Virulence SPI-1 Protein 1e-21 42
iagB NP_457271.1 cell invasion protein Virulence SPI-1 Protein 2e-21 41
iagB NP_806480.1 cell invasion protein Virulence SPI-1 Protein 2e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pilT YP_006137023.1 IncI1 conjugal transfer lytic transglycosylase PilT VFG0539 Protein 3e-22 42