Gene Information

Name : UMNK88_pIncI148 (UMNK88_pIncI148)
Accession : YP_006136995.1
Strain :
Genome accession: NC_017642
Putative virulence/resistance : Unknown
Product : putative transposase subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 44439 - 46010 bp
Length : 1572 bp
Strand : +
Note : -

DNA sequence :
ATGGACACCTCACTTGCTCATGAGAATGCCCGCCTGCGGGCACTGTTGCAGACGCAACAGGACACCATCCGCCAGATGGC
GAAATACAACCGCCTGCTCTCACAGCGGGTGGCGGCTTATGCTTCCGAAATCAACCGGCTGAAGGCGCTGGTTGCGAAAC
TGCAGCGCATGCAGTTCGGTAAAAGCTCAGAAAAACTTCGCGCTAAAACCGAACGGCAGATACAGGAAGCACAGGAGCGA
ATCAGCGCACTTCAGGAAGAAATGGCGGAAACGCTGGGTGAGCAATATGACCCGGTACTGCCATCCGCCCTGCGCCAGTC
TTCAGCCCGTAAACCGTTACCGGCCTCACTTCCCCGTGAAACCCGGGTCATCCGGCCGGAAGAGGAATGCTGCCCGGCCT
GTGGTGGTGACCTTAGTCCTCTGGGGTGTGATGTGTCAGAGCAACTGGAGCTTATCAGCAGCGCCTTTAAGGTTATCGAA
ACACAACGTCCGAAACTGGCCTGTTGTCGGTGCGACCATATCGTGCAGGCAACAGTACCTTCAAAACCCATTGCACGCAG
TTATGCCGGAGCGGGGCTTCTGGCCCATGTTGTTACCGGGAAATATGCAGACCATCTGCCGTTATACCGCCAGTCAGAAA
TATACCGTCGCCAGGGCGTGGAGCTGAGCCGCGCCACGCTGGGGCGCTGGACAGGTGCCGTTGCTGAACTGCTGGAGCCG
CTGTATGACGTCCTGCGCCAGTATGTGCTGATGCCCGGTAAAGTCCATGCTGATGATATCCCCGTCCCGGTCCAGGAGCC
GGGCAGCGGTAAAACCCGGACCGCCCGGCTGTGGGTCTACGTCCGTGATGACCGTAACGCCGGTTCGGAAATGCCCCCGG
CGGTCTGGTTCGCGTACTCACCGGACCGGAAAGGTATCCATCCACAAAATCATCTGGCCGGTTACAGCGGTGTGCTTCAG
GCCGATGCTTACGGTGGTTACCGGGTGGTATACGAATCCGGCAGAATAACGGAAGCCGCGTGTATGGCTCATGCCCGGAG
AAAAATCCACGATGTGCATGCAAGAGTGCCCACCGACATCACCACGGAAGCCCTGCAGCGTATCGGTGAACTGTATGCCA
TAGAGGCAGAAGTCCGGGGATGTACAGCAGAACAGCGTCTGGCGGCAAGAAAAGCCAGAGCTGCGCCACTGATGCAGTCA
CTGTATGACTGGATACAGACTCAGATGAAAACACTGTCGCGTCACTCGGATACGGCAAAAGCGTTCGCATACCTGCTGAA
ACAGTGGGATGGCCTGAACGTGTACTGCAGTAATGGCTGGGTGGAAATCGACAACAACATCGCAGAGAACGCCTTACGGG
GAGTGGCCGTAGGCCGGAAAAACTGGCTGTTCGCGGGTTCCGACAGCGGTGGCGAACATGCGGCGGTGTTGTACTCGCTG
ATCGGCACATGCCGTCTGAACAATGTGGAACCAGAAAAATGGCTGCGTTACGTCATTGAGCATATCCAGGATTGGCCGGC
AAACCGGGTACGCGATCTGTTGCCCTGGAAAGTTGATCTGACCTCTCAGTAA

Protein sequence :
MDTSLAHENARLRALLQTQQDTIRQMAKYNRLLSQRVAAYASEINRLKALVAKLQRMQFGKSSEKLRAKTERQIQEAQER
ISALQEEMAETLGEQYDPVLPSALRQSSARKPLPASLPRETRVIRPEEECCPACGGDLSPLGCDVSEQLELISSAFKVIE
TQRPKLACCRCDHIVQATVPSKPIARSYAGAGLLAHVVTGKYADHLPLYRQSEIYRRQGVELSRATLGRWTGAVAELLEP
LYDVLRQYVLMPGKVHADDIPVPVQEPGSGKTRTARLWVYVRDDRNAGSEMPPAVWFAYSPDRKGIHPQNHLAGYSGVLQ
ADAYGGYRVVYESGRITEAACMAHARRKIHDVHARVPTDITTEALQRIGELYAIEAEVRGCTAEQRLAARKARAAPLMQS
LYDWIQTQMKTLSRHSDTAKAFAYLLKQWDGLNVYCSNGWVEIDNNIAENALRGVAVGRKNWLFAGSDSGGEHAAVLYSL
IGTCRLNNVEPEKWLRYVIEHIQDWPANRVRDLLPWKVDLTSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 0.0 98
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-113 67
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 2e-143 63
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 1e-143 63
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 3e-133 61
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 4e-138 60
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 3e-138 60
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 2e-138 60
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 2e-138 60
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 2e-138 60
unnamed AAC31494.1 L0015 Not tested LEE Protein 2e-138 60
tnp AEA34686.1 transposase Not tested Not named Protein 1e-139 60
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 1e-137 59
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 1e-137 59
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 6e-138 59
unnamed AAL57570.1 unknown Not tested LEE Protein 2e-138 59
unnamed AAL08460.1 unknown Not tested SRL Protein 5e-98 57
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 5e-117 54
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 3e-128 53
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 9e-117 53
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 9e-117 53
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 2e-79 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMNK88_pIncI148 YP_006136995.1 putative transposase subunit VFG1700 Protein 4e-114 67
UMNK88_pIncI148 YP_006136995.1 putative transposase subunit VFG0793 Protein 9e-139 60
UMNK88_pIncI148 YP_006136995.1 putative transposase subunit VFG1051 Protein 3e-98 57
UMNK88_pIncI148 YP_006136995.1 putative transposase subunit VFG1736 Protein 5e-97 53