Gene Information

Name : UMNK88_1015 (UMNK88_1015)
Accession : YP_006132803.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1018264 - 1019151 bp
Length : 888 bp
Strand : -
Note : putative transposase

DNA sequence :
ATGCCACTGCTGGATAAGCTGCGTGAGCAGTACGGGGTCGGACCGGTATGCAGCGAACTGCATATTGCCCCGTCAACGTA
TTACCATTGTCAGCAACAGCGACATCATCCGGATAAACGCAGTGCCCGTGCGCAGCACGACGACTGGCTGAAGAGAGAGA
TACAGCGCGTATACGATGAAAATCATCAGGTGTACGGTGTGCGTAAAGTCTGGCGTCAGTTGTTACGGGAAGGAATCAGG
GTGGCCAGATGTACAGTGGCACGTCTCATGGCGGTTATGGGACTTGCCGGTGTTCTCCGGGGTAAAAAGGTCCGTACGAC
CATCAGCCGGAAAGCCGTTGCCGCAGGCGACCGCGTAAACCGTCAGTTCGTGGCAGAACGACCTGACCAGCTGTGGGTGG
CTGATTTTACTTACGTCAGCACATGGCAGGGCTTCGTCTATGTGGCGTTTATCATTGATGTGTTTGCCGGATACATCGTG
GGGTGGCGGGTCTCATCGTCTATGGAAACGACATTCGTGCTGGATGCGCTGGAGCAGGCGTTGTGGGCCCGTCGTCCGTC
TGGCACCATCCATCACAGCGATAAAGGCTCTCAGTATGTGTCACTGGCCTATACGGAGCGACTAAAAGAAGCCGGATTAC
TGGCATCAACAGGGAGTACAGGCGACTCGTATGACAACGCGATGGCTGAGAGCATCAATGGTCTTTACAAAGCGGAGGTA
ATACACCGTAAGAGCTGGAAAAACCGTGCAGAAGTGGAACTGGCCACACTAACGTGGGTGGACTGGTATAACAATCGACG
ATTGCTGGGAAGGCTGGGCCATACTCCTCCGGCAGAAGCAGAAAAAGCTTATTATGCTTCCATCGGAAACAATGATCTGG
CAGCCTGA

Protein sequence :
MPLLDKLREQYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSARAQHDDWLKREIQRVYDENHQVYGVRKVWRQLLREGIR
VARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAGYIV
GWRVSSSMETTFVLDALEQALWARRPSGTIHHSDKGSQYVSLAYTERLKEAGLLASTGSTGDSYDNAMAESINGLYKAEV
IHRKSWKNRAEVELATLTWVDWYNNRRLLGRLGHTPPAEAEKAYYASIGNNDLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 4e-94 99
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 4e-136 99
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 4e-136 99
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-134 98
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 2e-134 98
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 1e-134 98
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 1e-134 98
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 3e-108 98
Z1221 NP_286756.1 transposase Not tested TAI Protein 5e-132 97
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 1e-130 97
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 3e-92 97
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 1e-130 97
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 1e-130 97
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 4e-130 97
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 9e-132 97
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 1e-133 97
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-99 97
Z1198 NP_286733.1 transposase Not tested TAI Protein 2e-131 96
Z1638 NP_287141.1 transposase Not tested TAI Protein 2e-131 96
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 2e-129 96
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 3e-130 96
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 1e-51 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMNK88_1015 YP_006132803.1 hypothetical protein VFG1602 Protein 2e-130 96