Gene Information

Name : UMNK88_5239 (UMNK88_5239)
Accession : YP_006136868.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5111388 - 5111735 bp
Length : 348 bp
Strand : -
Note : putative transposase

DNA sequence :
ATGATCCRGTTACCTTCCGGGAGCAAAATTTGGCTGGTTGCCGGTATCACCGATATGAGAAATGGCTTCAACGGCCTGGC
TGCGAAAGTACAAACGGCGCTGAAAGACGATCCCATGTCCGGCCATGTTTTCATTTTCCGGGGCCGCAGCGGCAGTCAGG
TTAAACTGCTGTGGTCCACCGGTGACGGACTGTGCCTCCTGACCAAACGGCTGGAGCGTGGGCGCTTCGCCTGGCCGTCA
GCCCGTGATGGCAAAGTGTTCCTTACGCAGGCGCAGCTGGCGATGCTGCTGGAAGGTATCGACTGGCGACAGCCCAAGCG
GCTGCTGACCTCCCTGACCATGCTGTAA

Protein sequence :
MIXLPSGSKIWLVAGITDMRNGFNGLAAKVQTALKDDPMSGHVFIFRGRSGSQVKLLWSTGDGLCLLTKRLERGRFAWPS
ARDGKVFLTQAQLAMLLEGIDWRQPKRLLTSLTML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 2e-48 99
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-48 99
unnamed AAC31493.1 L0014 Not tested LEE Protein 2e-48 99
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 3e-48 99
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 2e-48 99
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 3e-48 99
unnamed AAL99258.1 unknown Not tested LEE Protein 2e-48 99
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 3e-48 99
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 2e-47 98
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 2e-47 98
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 2e-35 97
unnamed AAL08461.1 unknown Not tested SRL Protein 4e-48 97
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-47 96
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 1e-47 96
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 5e-39 77
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 5e-39 77
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 1e-38 76
ECO103_3553 YP_003223420.1 hypothetical protein Not tested LEE Protein 1e-36 71
Z4316 NP_289542.1 hypothetical protein Not tested OI-122 Protein 1e-36 71
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 5e-29 67
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 4e-34 65
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 4e-34 65
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 8e-35 64
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 8e-35 64
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 1e-34 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMNK88_5239 YP_006136868.1 hypothetical protein VFG0792 Protein 8e-49 99
UMNK88_5239 YP_006136868.1 hypothetical protein VFG1709 Protein 8e-49 99
UMNK88_5239 YP_006136868.1 hypothetical protein VFG1052 Protein 2e-48 97
UMNK88_5239 YP_006136868.1 hypothetical protein VFG1517 Protein 9e-36 97
UMNK88_5239 YP_006136868.1 hypothetical protein VFG1698 Protein 4e-48 96
UMNK88_5239 YP_006136868.1 hypothetical protein VFG1665 Protein 4e-39 76
UMNK88_5239 YP_006136868.1 hypothetical protein VFG1737 Protein 3e-35 63