Gene Information

Name : UMNK88_5233 (UMNK88_5233)
Accession : YP_006136862.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5106102 - 5106605 bp
Length : 504 bp
Strand : +
Note : putative transposase

DNA sequence :
ATGTCGCGCCAGTGCACGCATTATGGGCGTTGGCCTCAACACGGTTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGT
AACCTCGCGCATACAACCGGGCAGTGATGTGATTGTCTGCGCTGAAATGGACGAACAGTGGGGCTACGTCGGTGCTAAAT
CACGTCAGCGCTGGCTGTTTTACGCGTATGACAGGATACGGAGGACGGTTGTGGCGCACGTCTTCGGTGAACGCACTCTG
GCCACACTGGAGCGTCTTCTGAGCCTGCTGTCGGCCTTTGAGGTCGTGGTATGGATGACGGATGGCTGGCCGCTGTATGA
ATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGAC
AACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTAT
CTGAACATAAAACACTATCAGTAA

Protein sequence :
MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL
ATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKLLSFSKSVELHDKVIGHY
LNIKHYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec38 AAW51721.1 InsB Not tested AGI-3 Protein 2e-52 100
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 1e-66 99
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 2e-66 99
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 3e-67 99
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 3e-67 99
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 3e-66 97
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 4e-48 97
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 5e-63 93
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 8e-63 90
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 8e-63 90
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 8e-63 90
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 Protein 3e-60 89

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMNK88_5233 YP_006136862.1 hypothetical protein VFG0612 Protein 8e-67 97