Gene Information

Name : UMNK88_5217 (UMNK88_5217)
Accession : YP_006136846.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5090574 - 5091287 bp
Length : 714 bp
Strand : -
Note : putative transposase

DNA sequence :
GTGGCACATATCCGCACTCGCGAAACATATGGAACCCGGCGCCTCCAGACGGAGCTGGCAGAGAATGGCATCATCGTTGG
TCGTGACCGACTGGCACGTCTTCGTAAGGAGCTAAGGCTACGCTGTAAGCAGAAACGCAAGTTCAGAGCAACTACGAACT
CGAACCACAATCTGCCAGTTGCGCCAAATCTGCTGAACCAGACGTTCGCTCCTACAGCACCAAATCAGGTCTGGGTGGCG
GACCTGACGTATGTTGCCACACAGGAGGGATGGTTGTACCTCGCTGGCATCAAAGATGTTTATACGTGCGAAATTGTCGG
CTACGCCATGGGAGAGCGCATGACAAAAGAGCTGACAGGTAAAGCCCTGTTTATGGCGCTCAGGAGCCAGCGCCCACCTG
CCGGGCTAATCCACCACTCTGATCGAGGTTCACAGTACTGCGCATACGATTACCGGGTCATACAGGAGCAGTTTGGTCTG
AAAACATCAATGTCGCGTAAAGGTAACTGTTACGACAACGCTCCGATGGAAAGCTTCTGGGGAACGCTGAAAAATGAGAG
CCTGAGCCACTATCGTTTTAATAACCGGGATGAAGCCATCTCAGTAATACGGGAATACATTGAGATTTGCTACAATCGTC
AGCGTCGTCACTCTCGTCTGGGGAATATCTCCCCGGCAGCCTTCAGGGAAAAATATCATCAGATGGCTGCTTAA

Protein sequence :
MAHIRTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNSNHNLPVAPNLLNQTFAPTAPNQVWVA
DLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQFGL
KTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEICYNRQRRHSRLGNISPAAFREKYHQMAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 8e-95 99
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 8e-95 99
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 5e-95 99
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 5e-95 99
unnamed AAF09022.1 unknown Not tested SHI-O Protein 5e-95 99
unnamed AAF09030.1 unknown Not tested SHI-O Protein 4e-95 99
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 4e-95 99
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 4e-95 99
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 2e-93 98
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 3e-39 45
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 3e-39 45
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 3e-39 45
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 7e-37 44
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 2e-37 43
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 1e-37 43
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 3e-37 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMNK88_5217 YP_006136846.1 hypothetical protein VFG1706 Protein 2e-95 99
UMNK88_5217 YP_006136846.1 hypothetical protein VFG1631 Protein 4e-37 44