Gene Information

Name : UMNK88_5047 (UMNK88_5047)
Accession : YP_006136686.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4922164 - 4923738 bp
Length : 1575 bp
Strand : +
Note : -

DNA sequence :
ATGACAACAAACAGCTATCTTGAATATTTTCTGACCCTGCTGGGCTGGCTGATTAATAATGGCCTGTGGGATGTGCTGCT
GGGGACCGGGCTGTTTGCACTGCCGCTGGTATTTAAGGTTATTGGGATCTGGCTGCGGGTCAGGGAAGAAGGGGAGGATG
AGGGGAATAAGGGGCTGCTCTCGCTGCCCCGTATTGAACATGCGCTGTACATGGGATTCTTTGTGATTATCAGTTGCTGT
GTGCCGCTGGTCAATGTCAGTCTGGGGACTATTGAGTATGACGGCAACCGTGCGAAGCAGTGCGGGACATGGACACCGAA
GGCACCGGATAAGACCGGGTATGCCGGTGTGATTTCCAGCATGGACGGTAAAACGGCGCAGATCCCGCTGTGGTGGCTGA
TGGTGCACAAACTTTCAAAAGGGGTGACTCAGGCCGCCGTGGCATCCATTCCCTGTTCGCCTGATATGCGACAGATGCGT
TTTGAGGTTCAGCATACCCGGATCAACAATAAGGCGCTGATTGAAGAACTGCAGGATTTCACCAATGACTGCTACTCACT
GGCGCTGTACAGCTGGAAGCACCAGGATCAGGGAATGACAACGGATAAAAATACGCTGCGGGATATTGAGTGGATTGGCA
GCAGGACATTTCAGGCGCGTTATTACAATGAACTGCAGTCGAAGATGCCGAGAAGTGCGTTTCCGTGGAATGCATCCCGT
GACAGTGGACGCCCGAACACCGGTCGGGGTGGTTACCCGACCTGTAATGAGTGGTGGAGTGAGGCGGATGTCGGGCTGAA
AAGTCGGGTGATGAAGCAGGCTGACCCCGGTATGTGGCTGCGTCTGTCAGCAACGATGAAAATGATCGGGAATACAGGCA
AGGAGTATGAAGAAGCGGTGATACGCCGTCTGGTCAGTCCGGTGAATATGACAGTGTCACATGGTGGCAGAGCCTATGCT
GGTTATGGTGGGAATGCGGATTTGTCGCTGGATAACGCTGTGAGCCGCGTGTTCTCAACGGGGGGCGTGGCGCTGGGGAG
TCTGGCGGCGTTTCCGGCCCTGGATGCGATGCGACAGGCATTACCCATGGTACAGGGGATCCTGTTGATGGCTATTTACG
TGATGTTGCCGCTGATTCTGGCGTTTGCGGCGTACGAGATAAAGACGGTGATTACACTGACGTTTGTGATTTTTGCGACT
AATTTCCTGACGTTCTGGTGGGAACTGGCACGCTGGCTGGATTCATGGATGTTTACAGCGCTGTACAGTTCTGGAACGCA
CAGTCGCTTCAATATGGCAGGGTTTCAGAATACCTCAGATGACCTGATTATGAATCTGGTGATGGGCAGTATGTTCCTGA
TTCTGCCAGCGGTCTGGATGGGGGCATTATCCTGGGCCGGGGTGCAGATTGGAGTCGTTATGTCTGGAGCTATTGCAAAT
GGCTCAGAAGGAGCTCAGAAATCAGGGGGGGCAGCAGTTGATTTATTTCAGAGAAGTTTTATGAGCGGTATGTCTACACC
AACACCGCCGCCGCCACAACAAGCTCAATCCCAAAACAATAATAAAAAGTTATAA

Protein sequence :
MTTNSYLEYFLTLLGWLINNGLWDVLLGTGLFALPLVFKVIGIWLRVREEGEDEGNKGLLSLPRIEHALYMGFFVIISCC
VPLVNVSLGTIEYDGNRAKQCGTWTPKAPDKTGYAGVISSMDGKTAQIPLWWLMVHKLSKGVTQAAVASIPCSPDMRQMR
FEVQHTRINNKALIEELQDFTNDCYSLALYSWKHQDQGMTTDKNTLRDIEWIGSRTFQARYYNELQSKMPRSAFPWNASR
DSGRPNTGRGGYPTCNEWWSEADVGLKSRVMKQADPGMWLRLSATMKMIGNTGKEYEEAVIRRLVSPVNMTVSHGGRAYA
GYGGNADLSLDNAVSRVFSTGGVALGSLAAFPALDAMRQALPMVQGILLMAIYVMLPLILAFAAYEIKTVITLTFVIFAT
NFLTFWWELARWLDSWMFTALYSSGTHSRFNMAGFQNTSDDLIMNLVMGSMFLILPAVWMGALSWAGVQIGVVMSGAIAN
GSEGAQKSGGAAVDLFQRSFMSGMSTPTPPPPQQAQSQNNNKKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4579 NP_458664.1 putative membrane protein Not tested SPI-7 Protein 1e-154 63
t4276 NP_807874.1 hypothetical protein Not tested SPI-7 Protein 1e-154 63
PMI2570 YP_002152289.1 hypothetical protein Not tested Not named Protein 1e-157 62
YE3465 YP_001007626.1 hypothetical protein Not tested YAPI Protein 4e-113 47
Pmu_03040 YP_005176203.1 TraG-like domain-containing protein Not tested ICEPmu1 Protein 1e-104 46
RL014 AAP84141.1 conserved hypothetical protein Not tested PAPI-1 Protein 9e-96 46
EXA17 ABD94626.1 conserved hypothetical protein Not tested ExoU island A Protein 3e-95 46
YpsIP31758_3699 YP_001402653.1 hypothetical protein Not tested YAPI Protein 2e-114 46
api56 CAF28530.1 putative membrane protein Not tested YAPI Protein 6e-115 46
unnamed ABR13354.1 hypothetical protein Not tested PAGI-5 Protein 2e-95 46
pph92 CAI36133.1 hypothetical protein Not tested PPHGI-1 Protein 5e-94 43
ORF SG48 AAN62270.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-90 41
ORF C40 AAN62133.1 hypothetical protein Not tested PAGI-2(C) Protein 3e-91 41