Gene Information

Name : UMNK88_5045 (UMNK88_5045)
Accession : YP_006136684.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4920376 - 4921833 bp
Length : 1458 bp
Strand : +
Note : -

DNA sequence :
ATGAAGCATAAACCTAAACCACAACTGATAAATGTCGTGGCACTGGCCGTCATGCTGGCCTGCAGCACAATGGCCGGCGC
GGCGGAGAATGAACGCAGCACGTTCGGTCTCTCCCTGCCACAGGTGAATGACAGTGCCATCGGGTACGGGAAATCCATTG
ATGGTGCCATTTCGGACAAACTGTTTTACACCCTGGGAGGCGGGTCAGTGATATCGCAGCCGGCGACCCGGAGCAACATG
AAGAAGCTCGGGGTGGATATTGGCTGGAGCAGCAACCTGATGTGCGGCAACTTTGACCTGAAAACCACGGTGAGCAATCA
GCTGAACGGGGTGACGGACGGTTTTAAAAACCTGATGGGGGATGTGATACAGGGGGCGACGGGGGCGGTGGCCAGTCTGC
CGGCGATGGTCATCCAGCGGGCTAATCCGGGGCTGTATGACGCACTGACTAACGGGGTGTTACAGGCAAATGTGGCGTTC
GACAAGGCACAGCTGAACTGTCAGAACATGGCGAAGCGCATGATGGAGTTCTCGGACAGCAGCAAGTGGACACAGGCTGC
GGTTATGGAGGAGTACAAGTCACTGGTCAACAGTGGTGAAGCGGATGCCATTCGTATTGATCATCAGGCGCAGAATTTTA
AAGGAAATTCAGGACGTAGCTGGATTGGTGGTCAGAAACGGGGAGGTGCAGGGCAACCAGCTATCCGTCCCACACATGAT
CTGGCTGCAGCGGGTTTTAACATGATGAATAACCTGCCGGTTACCAGTACATCAACGGTCGGGAGTACCAGTTGTACCGG
AAGTGTGTGCAGTAAGTTCAGTAATGCTGAAGAGGCGGCAAAGGCGGTGGTGAAAGTGCTGGGTGATCGCACTATGCGAA
CCTGTAGTAAAGCAAATGAATGCACCAGTGGTGGTGAAGAGCAGCAGTCTGGTGCGATCGCCGGAACCGGATTCACGCCG
ATGCTGGAAGAAGCGGTGAAAGTGAATACGGAGCAACTGGTAAAACTGGTTAATGGTACTGAAAAACCGACAGCAGCAAA
TCTGGCTAAACTCCGGTCAGGCAGTCTGACAGTAACGGCCGGAGTGATTAAGGCGCTGCAACGGGATCCGGATAATGCTG
CACTGACCGGACGTCTGGCCGGCGAACTGGCAATGGCGGATACGGTGGAGACGGCGCTATTGATGCGCAGAATGATCGTG
ACGGGAATGTCTGAACCGAATGCGATGTTACAGGATGATGCATTGGCAGAGGGGGAGCGTCGTATTGAAGCGCTGGATCG
GGAGATTGCCGCGCTGAAAAACGAGATGGAGCTGAAGCGTGAACTGGCCCGCAACAGCGTACTGACCATTATTGAGCGTG
AGAATCAGCGAGTTGGCGTTAACCCGCAGACGGAAAGTGCAGACAGCTCTGATACCCGAATTAATCAACTGGAGCAGGGA
ACAGGTGAAGATGAATAA

Protein sequence :
MKHKPKPQLINVVALAVMLACSTMAGAAENERSTFGLSLPQVNDSAIGYGKSIDGAISDKLFYTLGGGSVISQPATRSNM
KKLGVDIGWSSNLMCGNFDLKTTVSNQLNGVTDGFKNLMGDVIQGATGAVASLPAMVIQRANPGLYDALTNGVLQANVAF
DKAQLNCQNMAKRMMEFSDSSKWTQAAVMEEYKSLVNSGEADAIRIDHQAQNFKGNSGRSWIGGQKRGGAGQPAIRPTHD
LAAAGFNMMNNLPVTSTSTVGSTSCTGSVCSKFSNAEEAAKAVVKVLGDRTMRTCSKANECTSGGEEQQSGAIAGTGFTP
MLEEAVKVNTEQLVKLVNGTEKPTAANLAKLRSGSLTVTAGVIKALQRDPDNAALTGRLAGELAMADTVETALLMRRMIV
TGMSEPNAMLQDDALAEGERRIEALDREIAALKNEMELKRELARNSVLTIIERENQRVGVNPQTESADSSDTRINQLEQG
TGEDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3466 YP_001007627.1 hypothetical protein Not tested YAPI Protein 1e-119 66
api55 CAF28529.1 putative exported protein Not tested YAPI Protein 8e-120 66
YpsIP31758_3700 YP_001402654.1 hypothetical protein Not tested YAPI Protein 5e-119 65
STY4577 NP_458662.1 hypothetical protein Not tested SPI-7 Protein 2e-122 64
t4274 NP_807872.1 hypothetical protein Not tested SPI-7 Protein 2e-122 64
unnamed AAX39459.1 unknown Not tested Hrp PAI Protein 1e-117 62
PMI2572 YP_002152291.1 hypothetical protein Not tested Not named Protein 4e-126 57
ORF C42 AAN62135.1 hypothetical protein Not tested PAGI-2(C) Protein 1e-71 42