Gene Information

Name : UMNK88_5044 (UMNK88_5044)
Accession : YP_006136683.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4919388 - 4920362 bp
Length : 975 bp
Strand : +
Note : -

DNA sequence :
ATGACGGGTCTGCGAACACGACGTTATGCTGGCGCATTTTTGTTGTGGACAGCGACTGTTTCTGTGGCCGGTGCTTCCCT
GAATACGGCACAGATAGTGGCCGGTGCTATTTCTCAGAGCTGCATCAGCTGGCGGGTCAGCGGTATCTGTTACTGGCTGC
ACTGCTCCTGGTCGGGGTGTCGGGTCAGAACGTCCGTGAAGGTCTCACATTTTATCCCTGAAGCAGTGGTGTCCACCTAT
ACCGCACCGGGCGGTAATCCCTGGCGGGAAATGGCTCTGGTCAGTCAGGCATCCGGCGGTGTGGAGAACACCATCAGCAG
CGGGATTGTGGGGTTATCTGCCGGCGGGGGAAACCCGGCAGATATGAAATCGCCGGGGCGGCGTAAATCTGCCATCCGTT
TCAAATACGCGGATGCACTGGGACATCCGGCCACGTTGCTTATCGGGGGCAGCATTCCCGGGTATTCGTGTGAGTCTGCT
GCCACACCACTGAGGCCTTATTTTCTCAGCACACTGGACAGCCTTGCCTGGCGTACCGGCATGCCTGAATCCCTGTATCC
CGAAGCCATGATACCCGGCAGACGTGAGCTGGGGAATCAGCGCAATGCGGACATGTGGGGAAATATCTACCCCCGTTCCG
GTTTTGTCAGCCAGACCGATGATGACAAAGCGGCAGCCCTGGTGGCCCAGCGGGTGGCGGATATCATCACCCGCACCGGA
GAGCCCCACGTCTATCAGTCGCTGAAAGGCCGAAAAAAGGATGGCTACTGGCCACCGGATGCGGTGGAAGAAAACACCGG
CACCCGTAATCACAAGTGGCAGCGACTGACCCCTTCCGTTTCTTCATCCTGCGCCGTGTTTCCGGATGGCAGTCATGCCG
CGCCGGAGGACGGTAATGCCGCGTTTGCCCTGTGGCGTCCCTACAGTTGCTGCAAAAAGCGGGGCCAGAAATTCCTGGGC
AGTACGAATTTTTAG

Protein sequence :
MTGLRTRRYAGAFLLWTATVSVAGASLNTAQIVAGAISQSCISWRVSGICYWLHCSWSGCRVRTSVKVSHFIPEAVVSTY
TAPGGNPWREMALVSQASGGVENTISSGIVGLSAGGGNPADMKSPGRRKSAIRFKYADALGHPATLLIGGSIPGYSCESA
ATPLRPYFLSTLDSLAWRTGMPESLYPEAMIPGRRELGNQRNADMWGNIYPRSGFVSQTDDDKAAALVAQRVADIITRTG
EPHVYQSLKGRKKDGYWPPDAVEENTGTRNHKWQRLTPSVSSSCAVFPDGSHAAPEDGNAAFALWRPYSCCKKRGQKFLG
STNF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2573 YP_002152292.1 hypothetical protein Not tested Not named Protein 7e-101 68
STY4576 NP_458661.1 hypothetical protein Not tested SPI-7 Protein 8e-101 65
t4273 NP_807871.1 hypothetical protein Not tested SPI-7 Protein 8e-101 65
YpsIP31758_3701 YP_001402655.1 hypothetical protein Not tested YAPI Protein 1e-91 64
api54 CAF28528.1 conserved hypothetical protein Not tested YAPI Protein 1e-91 64
YE3467 YP_001007628.1 hypothetical protein Not tested YAPI Protein 1e-86 62
unnamed AAX39458.1 unknown Not tested Hrp PAI Protein 1e-76 60
unnamed ABR13357.1 hypothetical protein Not tested PAGI-5 Protein 3e-67 49
pph89 CAI36130.1 hypothetical protein Not tested PPHGI-1 Protein 4e-70 48
Pmu_02990 YP_005176198.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 2e-59 48
RL017 AAP84144.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-66 48
ORF SG51 AAN62273.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-69 47
EXA20 ABD94629.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-67 47
ORF C43 AAN62136.1 hypothetical protein Not tested PAGI-2(C) Protein 9e-71 46