Gene Information

Name : UMNK88_5035 (UMNK88_5035)
Accession : YP_006136675.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4910896 - 4911828 bp
Length : 933 bp
Strand : +
Note : -

DNA sequence :
ATGGCAGTCACCGTCCGTCATTTCCTCCGGAATAGCCTGATGGCGCTTCCGTTACTGATACCCCCGTTTGTGCTGCATGC
TGACGAACTGATGAAGTGGGAGCGTATTCCGTTATCCGTACCCCTGAAGGTGGGGCAGGAGCGGGTGATTTTTGCGGACA
AAAATGTGCGGGTGGGATTCCCGCCGGCACTGAACGGTAAGCTGCGGGTGCAGAGTACCGGTGGTGCCGTGTACCTGAAG
GCGGACAGTGCCTTTCCACAGACACGGCTGCAGTTGCAGGATGTGGAGACCGGGGAAATGATTCTGCTCGATGTCACCGC
CGGTGAACAGGGACCTTCTGAGCCGGTACGTATTGTGTATGACGGTGAGGTCAGCACGGTCAGTCAGGCGACTGACCTGA
TGAAACCGGCGTCCTCATCCGGTAAAACCTCCGCCGGTCAGTCGCGGGCACCGGGACAGGATGACGGTACGCAGGCCCGT
CGTCAGCCGGTTCGTTACAGCGCGCCCCTGCCGGTGTTACTGACCCGTTACGCTGCCCAGTCCCTGTATGCCCCGCTCAG
GACTCTGGAGGCGGTGCCTGGTATTCACCCGGTCAGTCATCACCTGCCCGGACGCATCACCACCCTGTATCCGTCAGAGC
CCCTGACCGTCACGCCACTGGCGGCATGGGGCGCTGGCGGACGCACGGTGGTGGCGCTGAAGCTCATCAACACGATCAGC
CGTAAGGTGGTGCTGGACCCCAGGGCACTGCAGGGAAACTTTGTGACCGCCACCTTCCAGCATCGCTGGCTGGGACCTGC
AGGCACACCGGAGGACACCACAACACTGTATCTGGTGACAGAGGGCAGACCGGACAGGGCGTTTATCGCAGAGCCTGCCC
GGCGTAACGCCACCGCAGGACGTAAGGCCGGGGAGGTGAGCCATGCAGATTAA

Protein sequence :
MAVTVRHFLRNSLMALPLLIPPFVLHADELMKWERIPLSVPLKVGQERVIFADKNVRVGFPPALNGKLRVQSTGGAVYLK
ADSAFPQTRLQLQDVETGEMILLDVTAGEQGPSEPVRIVYDGEVSTVSQATDLMKPASSSGKTSAGQSRAPGQDDGTQAR
RQPVRYSAPLPVLLTRYAAQSLYAPLRTLEAVPGIHPVSHHLPGRITTLYPSEPLTVTPLAAWGAGGRTVVALKLINTIS
RKVVLDPRALQGNFVTATFQHRWLGPAGTPEDTTTLYLVTEGRPDRAFIAEPARRNATAGRKAGEVSHAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4569 NP_458654.1 hypothetical protein Not tested SPI-7 Protein 4e-79 64
t4266 NP_807864.1 hypothetical protein Not tested SPI-7 Protein 4e-79 64
YE3485 YP_001007644.1 hypothetical protein Not tested YAPI Protein 3e-73 59
api36 CAF28510.1 hypothetical protein Not tested YAPI Protein 1e-75 58
YpsIP31758_3708 YP_001402662.1 hypothetical protein Not tested YAPI Protein 2e-75 57
PMI2580 YP_002152299.1 hypothetical protein Not tested Not named Protein 3e-78 55
Pmu_03100 YP_005176209.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 4e-57 50
ORF C50 AAN62144.1 hypothetical protein Not tested PAGI-2(C) Protein 4e-52 50
pph81 CAI36122.1 hypothetical protein Not tested PPHGI-1 Protein 2e-53 48
ORF SG60 AAN62282.1 hypothetical protein Not tested PAGI-3(SG) Protein 9e-41 47
RL025 AAP84152.1 conserved hypothetical protein Not tested PAPI-1 Protein 4e-52 46
unnamed ABR13365.1 hypothetical protein Not tested PAGI-5 Protein 1e-51 46
EXA36 ABD94645.1 conserved hypothetical protein Not tested ExoU island A Protein 8e-52 46