Gene Information

Name : ssb (UMNK88_5017)
Accession : YP_006136657.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4899653 - 4900189 bp
Length : 537 bp
Strand : +
Note : -

DNA sequence :
ATGGCGTCACGCGGTATTAATAAGGTGATACTGATAGGACATCTTGGACAGGACCCGGAACTCCGTTACTTCCCCAATGG
CGGCGGAGCTGTGGCGAACCTGACCCTGGCCACCAGTGAATCCTGGCGTGATAAACAGAGCGGTGAAATGAAGGAGCAGA
CCGAGTGGCACCGCGTGGTGATTTTCGGAAAACTGGCGGAGATAGCCGGTGAATACCTGCGCAAGGGGTCACAGGTGTAC
ATCGAGGGCCAGTTAAAGACCCGGAAGTGGTTCGATCAGCAGAATGGTGTTGATCGCTACGCAACGGAGGTGGTGGTGAG
TGTCAACGGCACCCTGCAGATGCTGGGCTCTCCGCGCCAGCAGGGCAGCGGTGTCGCACCCGCACACAGCGGTCAGGGAA
CTGCCGGTGCACCGGCGGGTAACTCACCGTCACCGGCTTCCGGGAACGGCGGGGGAATGCCGATGGATTTTGACGACGAC
ATTCCCTTCAGTGGACCAGGATATGGCGCTGAACGGCGGATTATCCATGCCATGTAA

Protein sequence :
MASRGINKVILIGHLGQDPELRYFPNGGGAVANLTLATSESWRDKQSGEMKEQTEWHRVVIFGKLAEIAGEYLRKGSQVY
IEGQLKTRKWFDQQNGVDRYATEVVVSVNGTLQMLGSPRQQGSGVAPAHSGQGTAGAPAGNSPSPASGNGGGMPMDFDDD
IPFSGPGYGAERRIIHAM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 2e-40 59
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 2e-40 59
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 1e-40 59
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 2e-28 51