Gene Information

Name : UMNK88_5004 (UMNK88_5004)
Accession : YP_006136644.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4888742 - 4890454 bp
Length : 1713 bp
Strand : +
Note : -

DNA sequence :
ATGGCACACAAACCACTGAATCTCGGGGCTGCCATTATGCAGCCCGGTCGTCAGGCCAGTGCTGCCGGTAATGTGGTGGC
ACTGGGGGAAACCCCCATGATTCTGACGCTGGACCAGTTACGCCCGAATCCGGATAACCCGCGCACCACGCGCAATCCGC
GTTATGACGACATCAAAAACTCCATTCACGCCCGCGGGCTGGATACGGTGCCCAAAGTCACCCGTATGCCGGACAGTGAG
CCGGATGTGTATATCTTCAGTGACGGGGGAAACACCCGTTACCAGATACTGACGGAACTCTGGAAAGAAACAGGGGACCC
GCGTTTTTACCGTATTCATGTGCTGTTCAAACCCTGGCCGGGACGGCTTCAGTGTGTGATTGGTCATCTGGCGGAAAATG
AAGTTCGCGGTGAACTGACTTTTATTGAGAAAGCGCAGGGCATCCACAAGGCGCGCCTGATTTATGAAGAGCAGTTAAAC
AAAAGTGTGTCCATGCGGGAGCTGTCGTCATTACTGACGGAGCAGGGACTGCCGGTTGACGCCTCCAGTATCAGCAGGAT
GGAGAACGCCCTGAAATATCTGTACCCCTGGATCCCCGAACTGATGGAGTCAGGACTGGGGCGACATCAGGTTACGGCAC
TGCTGGCACTTCGTCAGGACGCAGAGCGTGTCTGGGGGCAGTTTGCGCTGGCGTCCGGCACGGATGCGGAATTTGACCGT
GTGTTCGGGGAAAGCTGCCGGAAGTTTAATTCGCCGGAGCTGTGGTCACTGGAGATGTTTCGCGATGAGCTGATCGGGGA
TTTGTTGCAGGCGCTGCCACATCCCTCCCTGGACTATGACCGGTGGCTGCTGGAGCTGGATCCAAAAGAGCGGAACCGCC
GTCACCATTTTGGTGAGCCGGAACCGGTGGTGGTACCGCCCTCAGTCCGTGACAGTGGCACAGGGCAGCCCGGTGCACCG
GTATCCCGTACCCGGTCTGAGGCACCGGAGTGTCTGCCGGATACGGACGCAGAGCCGGTGCCGGAAAGCACTGCCCCCGG
TACTGAGCCCGGACAGCAGGGTATCGCCCGACCGGAGAACGCTGTTTCTGACACAGACCACACTGAAAAATGCGGGTTTC
CTTCCCCGGAGGAGACTGCAGACAGAGCGCCTTCTTCTGCCGGGAAAGTCCGGCGTTCAGAGATACAGCCGGATATGTAC
GGTGGTGAGCCGGTTTTCAGCGGTGACGCTGTGGAAGCGGGGATTGCCGGGTCCGCTGTGCCATCCGTTATGACCGGCGA
TACAGCGCCGTCCGGAACACCTGATGCACTTCCTGCATCGGTGACGCATTTTGCTGAAGGACGGGATGATATCGAGCATC
TGCAGAATGAGGCTTTCCGGCTGGCATGGGAACTGGCTGAATCTGCCGGCTGTGCTGAAGAAATTGCCATGGACAGGGAA
AGTGACCTGTCGGCTGGTTTCGGGACTGCAGAGGAGAAATGTTCGCCGGTGACGGCATTTCTGGTGGGGCTGACCGGCGA
TGCGCCGCTGACAGTGTCTCCCGTCAGTCTGACAGACCTGCTGACAGGTGGCAGTGCGCCGGAGGCATGGCCACTGCTGG
ATGATGAACATGCCGTGAAGCTGCTGCGTCTTCTGAGTGTGCTGCGCCGTCTGCGCGCCCTGCAGCGCAGTGTGTTACCC
GAAGATGATGAGGAGGATGAAAGTGATGAGTGA

Protein sequence :
MAHKPLNLGAAIMQPGRQASAAGNVVALGETPMILTLDQLRPNPDNPRTTRNPRYDDIKNSIHARGLDTVPKVTRMPDSE
PDVYIFSDGGNTRYQILTELWKETGDPRFYRIHVLFKPWPGRLQCVIGHLAENEVRGELTFIEKAQGIHKARLIYEEQLN
KSVSMRELSSLLTEQGLPVDASSISRMENALKYLYPWIPELMESGLGRHQVTALLALRQDAERVWGQFALASGTDAEFDR
VFGESCRKFNSPELWSLEMFRDELIGDLLQALPHPSLDYDRWLLELDPKERNRRHHFGEPEPVVVPPSVRDSGTGQPGAP
VSRTRSEAPECLPDTDAEPVPESTAPGTEPGQQGIARPENAVSDTDHTEKCGFPSPEETADRAPSSAGKVRRSEIQPDMY
GGEPVFSGDAVEAGIAGSAVPSVMTGDTAPSGTPDALPASVTHFAEGRDDIEHLQNEAFRLAWELAESAGCAEEIAMDRE
SDLSAGFGTAEEKCSPVTAFLVGLTGDAPLTVSPVSLTDLLTGGSAPEAWPLLDDEHAVKLLRLLSVLRRLRALQRSVLP
EDDEEDESDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3513 YP_001007675.1 putative ATP/GTP binding protein Not tested YAPI Protein 3e-98 46
YpsIP31758_3746 YP_001402700.1 hypothetical protein Not tested YAPI Protein 6e-104 46
api3 CAF28477.1 conserved hypothetical protein Not tested YAPI Protein 5e-106 46
STY4523 NP_458618.1 hypothetical protein Not tested SPI-7 Protein 2e-94 45
t4228 NP_807830.1 hypothetical protein Not tested SPI-7 Protein 2e-94 45
PMI2639 YP_002152341.1 hypothetical protein Not tested Not named Protein 9e-72 41