Gene Information

Name : ribD (UMNK88_464)
Accession : YP_006132274.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 469455 - 470558 bp
Length : 1104 bp
Strand : +
Note : -

DNA sequence :
GTGCAGGACGAGTATTACATGGCGCGGGCGCTTAAGCTGGCGCAGCGGGGGCGTTTTACCACTCATCCCAACCCGAATGT
TGGGTGTGTCATTGTGAAAGATGGCGAAATCGTCGGTGAAGGTTACCATCACCGTGCTGGTGAACCACACGCCGAAGTAC
ATGCGTTGCGTATGGCTGGAGAAAAAGCCAAAGGTGCGACTGCGTATGTGACACTCGAACCTTGCAGCCATCATGGCCGT
ACGCCGCCTTGCTGTGATGCATTAATTGCCGCAGGTGTGGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGT
AGCCGGGCGAGGGCTATATCGCCTGCAACAAGCGGGTATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAACAAT
TGAATAAAGGCTTTCTCAAGCGGATGCGTACCGGCTTTCCTTATATCCAGTTAAAACTTGGCGCATCGCTTGATGGTCGT
ACGGCGATGGCCAGCGGTGAGAGCCAGTGGATTACTTCACCTCAGGCGCGGCGCGATGTACAACGCCTGCGCGCGCAAAG
TCATGCCATTTTAACCAGTAGCGCTACAGTACTGGCAGACGATCCGGCCTTAACGGTGCGTTGGTCTGAACTGGATGAAC
AAACTCAGGCACTTTATCCGCAACAAAATCTACGCCAGCCGGTACGTATTGTCATTGATAGCCAAAATCGTGTGACGCCT
GAACATCGTATCGTGCAGCAGCCTGGCGAAACCTGGTTTGCGCGTACACAGGAAGATTCTCGTGAATGGCCGGAAACAGT
TCGTAGTTTGCTCATCCCGGAACATAACGGACATCTGGATTTGGTGCTGCTCATGATGCAACTGGGTAAACAGCAGATTA
ACAGCATCTGGGTGGAAGCGGGGCCAACGCTCGCTGGCGCATTGCTGCAGGCGGGTTTAGTCGATGAGCTGATTGTCTAT
ATCGCACCTAAACTATTAGGCAGCGACGCCCGTGGATTATGCTCGCTGCCAGGGCTTGAGAAATTAGCCGACGCCCCCCA
ATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGA

Protein sequence :
MQDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHHRAGEPHAEVHALRMAGEKAKGATAYVTLEPCSHHGR
TPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVSHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGR
TAMASGESQWITSPQARRDVQRLRAQSHAILTSSATVLADDPALTVRWSELDEQTQALYPQQNLRQPVRIVIDSQNRVTP
EHRIVQQPGETWFARTQEDSREWPETVRSLLIPEHNGHLDLVLLMMQLGKQQINSIWVEAGPTLAGALLQAGLVDELIVY
IAPKLLGSDARGLCSLPGLEKLADAPQFKFKEIRHVGPDVCLHLVGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-65 47
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-65 47