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Name : UMNK88_3721 (UMNK88_3721) Accession : YP_006135420.1 Strain : Escherichia coli UMNK88 Genome accession: NC_017641 Putative virulence/resistance : Virulence Product : accessory colonization factor protein AcfD Function : - COG functional category : - COG ID : - EC number : - Position : 3594925 - 3599493 bp Length : 4569 bp Strand : - Note : - DNA sequence : ATGAATAAGAAATTTAAATATAAGAAATCGCTTTTAGCGGCTATTTTGAGCGCAACCCTGTTAGCCGGTTGTGATGGCGG TGGTTCCGGATCTTCCTCCGATACGCCGCCTGTAGATTCTGGAACAGGGTCTTTGCCGGAAGTGAAACCTGATCCAACAC CAAACCCGGAGCCGACGCCTGAGCCAACGCCGGAGCCTGAACCTACGCCGGAACCGACACCTGATCCTGAGCCAACACCA GAACCGGAGCCAGAACCTGTTCCTACGAAAACGGGTTATCTGACCCTGGGCGGAAGCCTGCGGGTAACTGGTGATATCAC CTGTAATGATGAATCCAGCGATGGCTTTACCTTTACACCAGGCGACAAAGTCACCTGTGTGGCAGGGAACAACACGACAA TTGCTACCTTCGACACCCAGTCAGAAGCTGCGCGTAGCCTGCGTGCGGTTGAAAAAGTGTCGTTTAGTCTTGAGGACGCG CAAGAACTGGCGGGTTCCGACAACAAGAAAAGCAATGCGCTCTCGCTGGTCACCTCCATGAACAGTTGCCCGGCGAATAC AGAACAGGTGTGCCTGGAGTTCTCCTCGGTGATCGAGAGTAAACGTTTCGACTCGCTGTATAAGCAAATCGATCTGGCAC CGGAAGAGTTCAAAAAGCTGGTCAATGAAGAGGTGGAAAACAATGCCGCGACTGATAAAGCGCCATCCACTCATACTTCA CCGGTAGTCCCCGTCACGACTCCGGGAACAAAACCGGATCTGAACGCCTCCTTCGTGTCGGCTAACGCGGAAGAGTTTTA TCAGTATCAACCTTCGGAAATCATTCTCTCAGAAGGTCGCCTGGTGGATAGCCAGGGATATGGTGTTGCTGGCGTCAACT ACTACACCAATTCAGGCCGTGGCGTGACAGGGGAAAATGGTGAATTTTCTTTTAGCTGGGGCGAAACCATCTCCTTTGGT ATCGATACCTTTGAACTGGGTTCAGTGCGCGGCAATAAGTCGACCATTGCGCTGACTGAACTGGGTGATGAAGTTCGCGG GGCGAATATCGATCAGCTTATTCATCGCTATTCGACGACCGGGCAAAATAATACCCGTGTAGTTCCGGATGAAGTACGCA AGGTTTTTGCTGAATATCCCAACGTGATTAACGAGATTATCAATCTCTCGTTATCCAATGGTGCGACGCTGGGGGAAGGT GAGCAAGTCGTTAATCTGCCTAACGAATTTATCGAGCAGTTTAAGACGGGTCAGGCCAAAGAGATCGATACCGCGATTTG TGCGAAAACCGACGGTTGTAACGAGGCTCGCTGGTTCTCGCTGACGACGCGCAATGTTAATGACGGCCAGATTCAGGGCG TTATCAACAAGCTGTGGGGCGTGGATACGAACTACAAATCTGTCAGTAAGTTCCATGTATTCCATGACTCCACCAACTTC TATGGCAGCACGGGTAATGCGCGCGGTCAGGCGGTGGTGAATATCTCCAACGCGGCCTTCCCGATTCTGATGGCGCGTAA TGATAAAAACTACTGGCTGGCCTTCGGCGAAAAACGCGCCTGGGATAAAAACGAGCTGGCGTACATTACGGAAGCGCCTT CTCTTGTTGAGCCGGAAAACGTTACGCGCGATACCGCCACCTTTAACCTGCCGTTTATTTCGCTGGGGCAAGTCGGTGAG GGCAAACTGATGGTTATCGGTAACCCACACTACAACAGCATTTTGCGTTGCCCGAACGGTTACAGCTGGAACGGGGGCGT TAATAAAGATGGGCAGTGTACGCTCAACAGCGACCCGGATGACATGAAGAACTTCATGGAGAACGTGCTGCGCTATCTGT CCGACGATAAATGGAAGCCGGACGCGAAAGCCAGCATGATCGTAGGCACCAACCTGGATACTGTCTATTTTAAACGTCAT GGTCAGGTTACAGGAAACAGCGCTGCGTTCGACTTCCATCCGGATTTTGCGGGCATCTCTGTTGAGCATTTAAGTAGCTA TGGCGATCTCGATCCGCAGGAAATGCCGCTGCTGATCCTTAACGGCTTTGAATATGTGACTCAGGTGGGTAACGATCCTT ATGAAATCCCGCTGCGTGCAGATACCAGCAAACCGAAGCTGACTCAGCAGGATGTGACCGATCTGATCGCCTATCTGAAC AAAGGTGGATCGGTGCTGATCATGGAAAACGTGATGAGCAATCTTAAGGAAGAGAGCGCGTCTGGTTTTGTGCGTCTGTT GGATGCCGCAGGTCTGTCGATGGCACTGAACAAGTCGGTAGTAAATAACGATCCGCAAGGGTATCCGAACCGCGTTCGTC AGCAGCGCGCAACGGGCATTTGGGTCTATGAACGTTATCCTGCCGTAGATGGTGCGCTGCCGTACACCATCGATAGTAAG ACAGGGGAAGTTAAGTGGAAATATCAGGTAGAAAACAAACCTGATGACAAACCGAAGCTGGAAGTTGCCAGCTGGCTGGA AGATGTAGATGGCAAACAGGAAACGCGTTATGCCTTTATTGATGAGGCCGATCATAAAACAGAGGATTCTCTGAAGGCTG CGAAGGAGAAAATTTTCGCCGCGTTCCCGGGGCTGAAAGAGTGTACTAATCCGGCATATCACTATGAGGTCAACTGCCTG GAATATCGTCCTGGCACGGGGGTTCCGGTTACTGGTGGCATGTATGTTCCACAGTATACGCAACTAAGCCTTAACGCCGA CACTGCAAAAGCGATGGTGCAGGCTGCGGATTTAGGCACCAACATTCAGCGTCTGTATCAGCATGAGCTCTACTTCCGGA CCAATGGTCGCAAAGGTGAGCGTCTGAGCAGCGTCGATCTGGAACGTCTGTACCAGAACATGTCGGTCTGGCTGTGGAAC GATACGAGCTATCGTTATGAAGAAGGCAAAAATGACGAGCTGGGCTTTAAAACGTTCACCGAGTTCCTGAACTGCTACGC CAATGATGCCTATGCAGGCGGCACCAAGTGTTCTGCAGATCTGAAAAAATCGCTGGTCGATAACAACATGATCTACGGTG ACGGTAGCAGCAAAGCGGGCATGATGAACCCGAGCTACCCGCTCAACTATATGGAAAAACCGCTGACACGCCTGATGCTG GGCCGTTCCTGGTGGGATCTGAACATCAAAGTTGATGTCGAGAAGTATCCGGGAGCAGTATCGGAAGAGGGACAGAACGT TACTGAAACCATCAGCCTGTACTCGAATCCGACCAAATGGTTTGCAGGTAACATGCAGTCAACTGGCCTGTGGGCACCGG CTCAGAAAGAGGTCACCATTAAGTCCAATGCGAACGTTCCTGTGACCGTCACCGTGGCGCTGGCTGACGACCTGACCGGA CGTGAGAAGCATGAAGTTGCGCTGAACCGTCCGCCAAGAGTGACTAAAACGTACTCTCTGGACGCTAGCGGTACGGTGAA GTTCAAGGTGCCTTACGGTGGCCTGATTTATATCAAGGGCAATAGCTCTACCAATGAATCTGCCAGCTTCACCTTTACTG GCGTGGTAAAAGCACCGTTCTATAAAGACGGCGCATGGAAAAACGATCTGAACTCACCGGCTCCGCTGGGTGAGCTGGAA TCAGACGCTTTCGTCTATACCACACCGAAGAAGAACCTGAATGCCAGCAATTACACTGGCGGACTGGAGCAATTCGCTAA CGATCTGGATACCTTTGCCAGCTCGATGAATGACTTCTACGGCCGTGATAGCGAAGACGGTAAGCACCGGATGTTTACCT ATAAAAACTTGCCGGGCCACAAACATCGTTTCACCAACGATGTGCAGATCTCCATCGGTGATGCGCACTCTGGTTATCCG GTGATGAACAGCAGCTTCTCGCCGAACAGCACCACGCTGCCGACGACGCCGCTGAACGACTGGCTGATCTGGCATGAAGT CGGTCATAACGCCGCAGAAACGCCGTTGACTGTACCGGGTGCAACTGAAGTCGCTAACAACGTGCTGGCGCTGTACATGC AGGATCGTTATCTCGGCAAGATGAACCGTGTCGCTGACGATATTACCGTCGCACCGGAATATCTGGAGGAGAGCAACAAC CAGGCATGGGCACGCGGCGGTGCGGGTGACCGTCTGCTGATGTACGCACAGCTGAAGGAATGGGCAGAGAAAAACTTTGA TATCAAGAAATGGTATCCAGATGGCACTCCTCTGCCAGAGTTTTACAGCGAGCGTGAAGGGATGAAAGGCTGGAACCTGT TCCAGTTGATGCATCGTAAAGCACGCGGCGATGAGGTCAGCAATGACAAGTTTGGCGGCAAGAATTACTGTGCTGAATCC AACGGTAACGCAGCGGACACGCTGATGCTGTGTGCCTCCTGGGTCGCCCAGACGGATCTTTCGGAGTTCTTTAAGAAATG GAATCCGGGCGCGAATGCTTACCAGCTGCCGGGGGCGAGCGAGATGAGCTTCGAGGGCGGTGTGAGCCAGTCGGCTTACA ACACGCTCGCGTCACTCGATCTGCCGAAACCGGAACAGGGACCGGAAACCATTAATCAGGTTACCGAGCATAAGATGTCT GCCGAGTAA Protein sequence : MNKKFKYKKSLLAAILSATLLAGCDGGGSGSSSDTPPVDSGTGSLPEVKPDPTPNPEPTPEPTPEPEPTPEPTPDPEPTP EPEPEPVPTKTGYLTLGGSLRVTGDITCNDESSDGFTFTPGDKVTCVAGNNTTIATFDTQSEAARSLRAVEKVSFSLEDA QELAGSDNKKSNALSLVTSMNSCPANTEQVCLEFSSVIESKRFDSLYKQIDLAPEEFKKLVNEEVENNAATDKAPSTHTS PVVPVTTPGTKPDLNASFVSANAEEFYQYQPSEIILSEGRLVDSQGYGVAGVNYYTNSGRGVTGENGEFSFSWGETISFG IDTFELGSVRGNKSTIALTELGDEVRGANIDQLIHRYSTTGQNNTRVVPDEVRKVFAEYPNVINEIINLSLSNGATLGEG EQVVNLPNEFIEQFKTGQAKEIDTAICAKTDGCNEARWFSLTTRNVNDGQIQGVINKLWGVDTNYKSVSKFHVFHDSTNF YGSTGNARGQAVVNISNAAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSLVEPENVTRDTATFNLPFISLGQVGE GKLMVIGNPHYNSILRCPNGYSWNGGVNKDGQCTLNSDPDDMKNFMENVLRYLSDDKWKPDAKASMIVGTNLDTVYFKRH GQVTGNSAAFDFHPDFAGISVEHLSSYGDLDPQEMPLLILNGFEYVTQVGNDPYEIPLRADTSKPKLTQQDVTDLIAYLN KGGSVLIMENVMSNLKEESASGFVRLLDAAGLSMALNKSVVNNDPQGYPNRVRQQRATGIWVYERYPAVDGALPYTIDSK TGEVKWKYQVENKPDDKPKLEVASWLEDVDGKQETRYAFIDEADHKTEDSLKAAKEKIFAAFPGLKECTNPAYHYEVNCL EYRPGTGVPVTGGMYVPQYTQLSLNADTAKAMVQAADLGTNIQRLYQHELYFRTNGRKGERLSSVDLERLYQNMSVWLWN DTSYRYEEGKNDELGFKTFTEFLNCYANDAYAGGTKCSADLKKSLVDNNMIYGDGSSKAGMMNPSYPLNYMEKPLTRLML GRSWWDLNIKVDVEKYPGAVSEEGQNVTETISLYSNPTKWFAGNMQSTGLWAPAQKEVTIKSNANVPVTVTVALADDLTG REKHEVALNRPPRVTKTYSLDASGTVKFKVPYGGLIYIKGNSSTNESASFTFTGVVKAPFYKDGAWKNDLNSPAPLGELE SDAFVYTTPKKNLNASNYTGGLEQFANDLDTFASSMNDFYGRDSEDGKHRMFTYKNLPGHKHRFTNDVQISIGDAHSGYP VMNSSFSPNSTTLPTTPLNDWLIWHEVGHNAAETPLTVPGATEVANNVLALYMQDRYLGKMNRVADDITVAPEYLEESNN QAWARGGAGDRLLMYAQLKEWAEKNFDIKKWYPDGTPLPEFYSEREGMKGWNLFQLMHRKARGDEVSNDKFGGKNYCAES NGNAADTLMLCASWVAQTDLSEFFKKWNPGANAYQLPGASEMSFEGGVSQSAYNTLASLDLPKPEQGPETINQVTEHKMS AE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAE85238.1 | hypothetical protein | Not tested | PAI V 536 | Protein | 0.0 | 92 |
| VC0395_A0370 | YP_001216326.1 | lipoprotein | Not tested | VPI-1 | Protein | 0.0 | 50 |
| VC0845 | NP_230493.1 | hypothetical protein | Not tested | VPI-1 | Protein | 0.0 | 49 |
| acfD | AAK20802.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75649.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75646.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75664.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75670.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75655.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75652.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75661.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75667.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75658.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| UMNK88_3721 | YP_006135420.1 | accessory colonization factor protein AcfD | VFG0106 | Protein | 0.0 | 49 |
