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Name : gspF (UMNK88_3715) Accession : YP_006135414.1 Strain : Escherichia coli UMNK88 Genome accession: NC_017641 Putative virulence/resistance : Virulence Product : general secretion pathway protein GspF Function : - COG functional category : - COG ID : - EC number : - Position : 3587659 - 3588882 bp Length : 1224 bp Strand : - Note : - DNA sequence : ATGGCACTGTTTTACTATCAGGCGCTGGAGCGTAATGGTCGCAAAACCAAAGGTATGATTGAGGCGGATTCCGCGCGTCA TGCCCGCCAGTTGTTGCGCGGTAAAGAGCTTATCCCCGTGCATATTGAAGCCCGGATGAATACTTCGTCAGGGGGGATGT TGCAGCGTCGGCGGCACGCACATCGTCGCGTGGCGGCGGCAGATCTGGCGCTGTTCACGCGCCAACTGGCAACGTTAGTA CAGGCAGCAATGCCGCTGGAAACCTGCTTACAGGCGGTAAGTGAGCAAAGTGAAAAACTGCATGTAAAAAGCCTCGGAAT GGCGCTGCGCAGCCGGATTCAGGAAGGTTACACCCTGTCGGACAGCCTGCGCGAACATCCCCGCGTCTTTGATTCCCTGT TTTGTTCGATGGTTGCTGCCGGAGAAAAATCCGGGCATCTCGACGTGGTGCTCAATCGCCTGGCAGATTACACCGAACAG CGACAGCGCCTGAAATCACGTCTGTTGCAGGCCATGCTCTATCCGCTGGTTCTGCTGGTGGTGGCAACGGGCGTGGTCAC TATTTTGCTGACGGCAGTGGTGCCGAAAATCATCGAACAGTTTGATCATCTCGGACACGCGCTGCCCGCCTCCACCCGCA CGCTTATTGCCATGAGCGACGCGTTACAGGCCAGCGGCGTTTACTGGCTGGCGGGTTTGCTGGGGCTTCTGGTGCTGGGG CAACGGCTACTTAAAAATCCTGCTATGCGCCTGCGCTGGGATCAAACCGTGCTGCGCCTGCCTGTGACGGGGCGTGTTGC GCGCGGGCTGAATACGGCGCGTTTTTCCCGCACCTTAAGCATCCTCACCGCCAGCAGTGTTCCGCTACTGGAAGGTATTC AGACCGCTGCCGCCGTGTCGGCAAATCGCTATGTCGAACAACAACTACTGCTGGCGGCAGATCGCGTCCGCGAAGGAAGC AGTCTGCGTGCCGCGCTGGCGGAGTTGCGCCTGTTCCCGCCGATGATGCTGTACATGATCGCCTCCGGCGAACAGAGCGG CGAACTGGAAACCATGCTTGAGCAGGCCGCAGTCAACCAGGAACGGGAATTTGATACCCAGGTGGGGCTGGCGTTAGGGC TGTTTGAACCGGCGCTGGTGGTGATGATGGCGGGCGTGGTGCTGTTTATCGTCATCGCCATCCTTGAGCCGATGCTGCAA CTGAACAATATGGTTGGAATGTAA Protein sequence : MALFYYQALERNGRKTKGMIEADSARHARQLLRGKELIPVHIEARMNTSSGGMLQRRRHAHRRVAAADLALFTRQLATLV QAAMPLETCLQAVSEQSEKLHVKSLGMALRSRIQEGYTLSDSLREHPRVFDSLFCSMVAAGEKSGHLDVVLNRLADYTEQ RQRLKSRLLQAMLYPLVLLVVATGVVTILLTAVVPKIIEQFDHLGHALPASTRTLIAMSDALQASGVYWLAGLLGLLVLG QRLLKNPAMRLRWDQTVLRLPVTGRVARGLNTARFSRTLSILTASSVPLLEGIQTAAAVSANRYVEQQLLLAADRVREGS SLRAALAELRLFPPMMLYMIASGEQSGELETMLEQAAVNQEREFDTQVGLALGLFEPALVVMMAGVVLFIVIAILEPMLQ LNNMVGM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 1e-153 | 98 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 9e-153 | 98 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspF | YP_006135414.1 | general secretion pathway protein GspF | VFG2049 | Protein | 9e-148 | 97 |
| gspF | YP_006135414.1 | general secretion pathway protein GspF | VFG0181 | Protein | 2e-68 | 47 |
