Gene Information

Name : gspI (UMNK88_3712)
Accession : YP_006135411.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Virulence
Product : general secretion pathway protein GspI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3586252 - 3586623 bp
Length : 372 bp
Strand : -
Note : -

DNA sequence :
ATGAAGCGCGGATTTACCTTGCTGGAAGTGATGCTCGCGCTGGCGATTTTTGCGCTGGCTGCCACGGCGGTGTTACAGAT
TGCCAGCGGTGCGCTGAGTAATCAGCAAATTCTTGAGGAAAAAACGGTAGCGGGCTGGGTGGCTGAAAACCAGACCGCGC
TGCTCTACCTGATGACCCGCGAGCAGCGGGCGGTCAGGCACCAGGGCGAGAGCGATATGGCAGGAAGCAGCTGGTACTGG
CGAACCACACCGCTGAGTACAGGCAACGCGCTGCTCCAGGCGGTGGATATTGAAGTCAGCCTTCACGAAGACTTTTCGTC
GGTGATTCAGTCACGACGCGCCTGGTTTAGCGCCGTGGGAGGCCAACAGTGA

Protein sequence :
MKRGFTLLEVMLALAIFALAATAVLQIASGALSNQQILEEKTVAGWVAENQTALLYLMTREQRAVRHQGESDMAGSSWYW
RTTPLSTGNALLQAVDIEVSLHEDFSSVIQSRRAWFSAVGGQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspI CAE85229.1 GspI, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-41 98
gspI YP_854402.1 type II secretion protein GspI Not tested PAI I APEC-O1 Protein 8e-41 94

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspI YP_006135411.1 general secretion pathway protein GspI VFG2052 Protein 1e-41 94