Gene Information

Name : gspJ (UMNK88_3711)
Accession : YP_006135410.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Virulence
Product : general secretion pathway protein GspJ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3585656 - 3586219 bp
Length : 564 bp
Strand : -
Note : -

DNA sequence :
ATGCTGGTGGCAATTGCCATTTTTGCCTCGCTGGCACTGATGGCGCAGCAGGTGACTAACGGCGTCACGCGCGTGAATAG
CGCCGTCGCCGGACACGATCAAAAACTAAACCTCATGCAGCAAACGATGAGTTTTCTGACCCACGATCTGACCCAAATGA
TGCCGCGTCCGGTAAGAGGCGATCAGGGCCAGCGTGAACCAGCTTTACTGGCTGGCGCTGGCGTGCTGGCGTCTGAGAGT
GAAGGAATGCGTTTTGTGCGCGGCGGTGTGGTTAACCCGTTGATGCGTCTGCCGCGCAGTAATCTGCTCACCGTCGGTTA
CCGCATTCATGACGGTTATCTCGAACGGTTAGCCTGGCCGCTGACCGATGCCGCAGGCAGCGTGAAGCCGACAATGCAAA
AGTTGATTCCGGCCGATTCGCTCCGTTTGCAGTTCTTCGACGGCACGCGCTGGCAGGAGAGCTGGTCGTCAGTACAGGCG
ATCCCTGTGGCGGTACGCATGACCCTGCATTCGCCGCAATGGGGCGAGATTGAACGCATCTGGTTGTTACGCGGGCCGCA
ATAA

Protein sequence :
MLVAIAIFASLALMAQQVTNGVTRVNSAVAGHDQKLNLMQQTMSFLTHDLTQMMPRPVRGDQGQREPALLAGAGVLASES
EGMRFVRGGVVNPLMRLPRSNLLTVGYRIHDGYLERLAWPLTDAAGSVKPTMQKLIPADSLRLQFFDGTRWQESWSSVQA
IPVAVRMTLHSPQWGEIERIWLLRGPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspJ YP_854401.1 type II secretion protein GspJ Not tested PAI I APEC-O1 Protein 1e-82 98
gspJ CAE85228.1 GspJ, hypothetical type II secretion protein Not tested PAI V 536 Protein 5e-83 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspJ YP_006135410.1 general secretion pathway protein GspJ VFG2053 Protein 8e-85 99