Gene Information

Name : UMNK88_3700 (UMNK88_3700)
Accession : YP_006135399.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3577929 - 3578162 bp
Length : 234 bp
Strand : +
Note : -

DNA sequence :
ATGCCGGGTTGTACATCACGTTTATTGCCCGAAGGCCCTTTCTCACGCAACCAGGCTCTTGCCGTCACAACGGCTTACCT
TAATGTGCTTATTGAAGATGACCAGGGAACGCATTTCCGGCTGGTGATCCGCAACGCTGAAGGCCAGCTACGCTGGCGCT
GCTGGAATTTTGAACCTGATGCCGGAAAACAGCTAAACCCGTATCTCGCCAGCGAGGGAATTCTCAGGCAATAA

Protein sequence :
MPGCTSRLLPEGPFSRNQALAVTTAYLNVLIEDDQGTHFRLVIRNAEGQLRWRCWNFEPDAGKQLNPYLASEGILRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ykfF CAE85198.1 YkfF protein Not tested PAI V 536 Protein 7e-32 100
unnamed CAD33784.1 hypothetical protein Not tested PAI I 536 Protein 8e-28 89
ORF_46 AAZ04455.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 8e-28 89
c5157 NP_757005.1 hypothetical protein Not tested PAI II CFT073 Protein 8e-28 89
aec70 AAW51753.1 Aec70 Not tested AGI-3 Protein 1e-17 69
ykfF ADD91705.1 YkfF Not tested PAI-I AL862 Protein 1e-17 69
unnamed CAI43842.1 hypothetical protein Not tested LEE Protein 1e-17 69
unnamed AAL67351.1 intergenic-region protein Not tested PAI II CFT073 Protein 1e-11 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMNK88_3700 YP_006135399.1 hypothetical protein VFG1525 Protein 3e-28 89