Gene Information

Name : UMNK88_3672 (UMNK88_3672)
Accession : YP_006135371.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3548066 - 3548422 bp
Length : 357 bp
Strand : +
Note : -

DNA sequence :
ATGTACGCAAAATCTTTTCTCGCACTTGATGGCAGCGGACGTCTGACCGGTGCCCGTACCGCACAGACTGCACCTTATGA
TCGCTACACCTGCCACCTTTGCGGCAGTGCACTCAGATACCACCCGCAATACGACACTGAACGTCCCTGGTTTGAACACA
CTGACGACGGGCTGACTGAGCACGGTCATGAGTGCCCTTATGTCAGACCGGAACGCAGGGAGGTACGCTTGATTAAACGT
CTGCAGCAATTCGTACCGGATGCCTTACCCGTGGTGCGTAAAGCCAGCTGGCACTGCAGACAATGTCACCACGATTATTA
TGGGGAGCGGTACTGCACACACTGCCAGACCGGATAA

Protein sequence :
MYAKSFLALDGSGRLTGARTAQTAPYDRYTCHLCGSALRYHPQYDTERPWFEHTDDGLTEHGHECPYVRPERREVRLIKR
LQQFVPDALPVVRKASWHCRQCHHDYYGERYCTHCQTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec60 AAW51743.1 Aec60 Not tested AGI-3 Protein 1e-52 98
unnamed ADD91715.1 hypothetical protein Not tested PAI-I AL862 Protein 5e-52 97
SF2981 NP_708755.1 hypothetical protein Not tested SHI-1 Protein 7e-52 95
unnamed AAK00467.1 unknown Not tested SHI-1 Protein 5e-52 95
S3186 NP_838469.1 hypothetical protein Not tested SHI-1 Protein 7e-52 95
unnamed CAI43833.1 hypothetical protein Not tested LEE Protein 1e-51 95
ECO103_3572 YP_003223433.1 hypothetical protein Not tested LEE Protein 2e-50 92
APECO1_1083 YP_853103.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 2e-49 91
unnamed CAE85181.1 hypothetical protein Not tested PAI V 536 Protein 3e-47 89

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMNK88_3672 YP_006135371.1 hypothetical protein VFG0645 Protein 2e-52 95