Gene Information

Name : UMNK88_2922 (UMNK88_2922)
Accession : YP_006134649.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2832094 - 2832981 bp
Length : 888 bp
Strand : -
Note : putative transposase

DNA sequence :
ATGCCACTGCTGGATAAGCTGCGTGAGCAGTACGGGGTCGGACCGGTATGCAGCGAACTGCATATTGCCCCGTCAACGTA
TTACCATTGTCAGCAACAGCGACATCATCCGGATAAACGCAGTGCCCGTGCGCAGCACGATGACTGGCTGAAGAGAGAGA
TACAGCGCGTATACGATGAAAATCATCAGGTGTACGGTGTGCGTAAAGTCTGGCGTCAGTTGTTACGGGAAGGAATCAGG
GTGGCCAGATGTACAGTGGCGCGCCTCATGGCGGTTATGGGACTTGCCGGTGTTCTCCGGGGTAAAAAGGTCCGCACTAC
CGTCAGCCGGAAAACCGTTGCCACAGGTGACCGCGTAAACCGTCAGTTCGTGGCAGAACGTCCTGACCAGCTGTGGGTGG
CTGATTTTACTTACGTCAGCACATGGCAGGGCTTCGTCTATGTGGCGTTTATCATTGATGTGTTTGCCGGATACATCGTG
GGGGGGCGGGTCTCATCGTCTATGGAAACGACATTCGTGCTGGATGCGCTGGAGCAGGCGTTGTGGGCCCGTCGTCCGTC
TGGCACCATCCATTACAGCGATAAAGGCTCTCAGTATGTGTCACTGGCCTATACGGAGCGACTAAAAGAAGCCGGATTAC
TGGCATCAACAGGGAGTACAGGCGACTCGTATGACAACGCGATGGCTGAGAGCATCAATGGTCTTTACAAAGCGGAGGTA
ATACACCGTAAGAGCTGGAAAAACCGTGCAGAAGTGGAACTGGCCACACTAACGTGGGTGGACTGGTATAACAATCGACG
ATTGCTGGGAAGGCTGGGCCATACTCCTCCGGCAGAAGCAGAAAAAGCTTATTATGCTTCCATCGGAAACAATGATCTGG
CAGCCTGA

Protein sequence :
MPLLDKLREQYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSARAQHDDWLKREIQRVYDENHQVYGVRKVWRQLLREGIR
VARCTVARLMAVMGLAGVLRGKKVRTTVSRKTVATGDRVNRQFVAERPDQLWVADFTYVSTWQGFVYVAFIIDVFAGYIV
GGRVSSSMETTFVLDALEQALWARRPSGTIHYSDKGSQYVSLAYTERLKEAGLLASTGSTGDSYDNAMAESINGLYKAEV
IHRKSWKNRAEVELATLTWVDWYNNRRLLGRLGHTPPAEAEKAYYASIGNNDLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 3e-132 98
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 2e-132 98
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-132 98
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 2e-133 98
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 2e-133 98
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 1e-131 97
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 4e-91 97
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 3e-128 96
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 3e-128 96
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 3e-128 96
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 8e-128 96
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 3e-129 96
Z1221 NP_286756.1 transposase Not tested TAI Protein 2e-129 96
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 8e-131 96
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 1e-105 96
Z1198 NP_286733.1 transposase Not tested TAI Protein 7e-129 95
Z1638 NP_287141.1 transposase Not tested TAI Protein 7e-129 95
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 3e-127 95
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 8e-128 95
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 3e-96 95
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 2e-89 94
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 1e-48 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMNK88_2922 YP_006134649.1 hypothetical protein VFG1602 Protein 4e-128 95