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Name : UMNK88_2890 (UMNK88_2890) Accession : YP_006134618.1 Strain : Escherichia coli UMNK88 Genome accession: NC_017641 Putative virulence/resistance : Virulence Product : outer membrane usher protein PapC Function : - COG functional category : - COG ID : - EC number : - Position : 2800368 - 2803013 bp Length : 2646 bp Strand : - Note : - DNA sequence : ATGCCTGACCATTCTCTTTTTCGATTACGGATTCTTCCGTGGTGCATTGCGCTGGCAATGTCAGGGAGTTATAGCAGTGT CTGGGCTGAAGACGACATTCAGTTTGATTCCCGTTTTCTGGAATTAAAAGGCGACACAAAAATTGATCTGAAGCGTTTTT CCAGCCAGGGATATGTTGAGCCCGGAAAATACAATTTACAGGTTCAACTAAATAAACAGCCATTGGCGGAAGAGTACGAT ATTTACTGGTATGCTGGTGAAGATGACGTTAGCAAAAGCTATGCTTGTCTGACACCGGAACTGGTGGCGCAGTTTGGTTT AAAAGAAGACGTGGCGAAAAATCTGCAATGGAGCCACGATGGTAAATGCCTGAAGCCCGGTCAACTGGAAGGCATGGAAA TTAAGGCTGATTTAAGCCAGTCCGCATTAGTCATTTCACTACCGCAGGCTTACCTCGAATATACCTGGCCCGACTGGGAT CCACCTTCTCGTTGGGATGATGGCATCTCCGGGATCATTGCGGACTACAGCATCACTGCGCAAACACGACACGAAGAAAA TGGCGGCGATGACAGTAACGAGATCAGCGGCAACGGGACGGTCGGGGTTAACCTGGGGCCATGGCGTATGCGCGCTGACT GGCAGACCAACTATCAACATACCCGCAGTAATGATGATGACGAGGAATTTAGCGGCGATGACACACAAAAAAAATGGGAG TGGAGTCGCTATTATGCCTGGCGGGCGTTACCGTCATTAAAAGCCAAACTGGCGCTGGGCGAAGATTACCTCAATTCCGA TATTTTCGACGGTTTTAATTATGTTGGTGGCAGTGTCAGCACTGACGATCAAATGTTGCCTCCCAACCTGCGCGGCTACG CGCCAGACATTTCCGGCGTGGCACACACCACAGCAAAAGTGACCGTCAGCCAGATGGGGCGTGTGATTTACGAAACGCAG GTTCCGGCTGGACCGTTTCGTATTCAGGATCTTGGTGATTCTATCTCCGGTACGCTGCACGTTCGCATTGAAGAACAGAA CGGCCAGGTACAGGAATATGACATCAGCACCGCCTCGATGCCATACCTCACTCGCCCAGGCCAGGTTCGCTATAAGATCA TGATGGGACGTCCGCAAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCTTCCTGGGGGATTGCT AACGGCTGGTCGTTATATGGCGGTGCGCTGGGTGATGAAAACTATCAGTCTGCGGCGCTGGGCGTCGGTCGCGATTTGTC TACCTTCGGCGCGGTCGCGTTTGATGTTACTCATTCGCATACCAAACTGGATAAAGACACCGCTTATGGCAAAGGTTCGC TGGACGGTAACTCCTTCCGTGTGAGTTATTCCAAAGACTTTGACCAGCTCAACAGCCGCGTCACTTTCGCTGGATATCGC TTCTCGGAAGAGAACTTTATGACCATGAGCGAGTATCTGGATGCCAGTGACAGCGAAATGGTCCGTACGGGCAACGACAA AGAGATGTACACCGCCACTTATAACCAGAACTTCCGCGATGCGGGTGTTTCGGTTTATCTCAACTATACCCGCCATACCT ACTGGGATCGTGAGGAGCAGACAAACTACAACATCATGCTCTCCCACTATTTCAATATGGGCAGCATTCGTAATATGAGC GTTTCCCTGACTGGCTACCGCTACGAGTATGACAACCGGGCGGATAAGGGCATGTACATTTCGCTCAGTATGCCGTGGGG CGACAACAGTACCGTTAGCTATAACGGCAACTATGGCAGTGGGACGGACAGCAGCCAGGTCGGTTATTTTAGCCGTGTCG ATGACGCGACTCACTATCAGTTGAACGTCGGCACCAGTGACAAACACACCAGCGTTGATAGCTACTACAGCCATGATGGT TCGCTGGCGCAGGTTGACCTCAGTGCGAACTACCATGAAGGGCAATACACCTCTGCGGGCTTGTCGTTACAGGGCGGCGC AACGCTTACTACCCACGGCGGCGCACTTCACCGTACCCAGAATATGGGCGGGACGCGCCTGTTGATTGATGCCGATGGTG TTGCCGATGTTCCGGTGGAAGGTAACGGGGCTGCTGTTTATACCAATATGTTTGGTAAAGCCGTCGTTTCTGACGTTAAC AATTATTATCGCAATCAGGCGTATATCGACCTCAACAAATTGCCGGAAAACGCCGAAACAACCCAGTCGGTGGTGCAAGC CACGCTAACTGAAGGAGCCATTGGCTACCGCAAATTTGCCGTCATCAGTGGTCAAAAAGCGATGGCGGTGCTGCGTTTAC AAGATGGCAGCCATCCACCGTTTGGCGCAGAAGTAAAAAATGATAACGAGCAGACAGTGGGCCTTGTCGATGATGACGGC AATGTTTATCTGGCTGGGGTGAAACCTGGCGAACATATGAGCGTGTTCTGGAGTGGTGTTGCGCATTGCGATATCAACCT GCCGGACCCGTTACCGGCTGATCTGTTTAACGGCTTGTTACTGCCATGCCAGCATAAAGGCAACGTCGCGCCGGTTGTTC CTGATGACATAAAGCCTGTCATTCAGGAGCAGACGCAACAGGTGACACCCACCGATCCCCCTGTTTCTGTTTCAGCTAAC CAATAA Protein sequence : MPDHSLFRLRILPWCIALAMSGSYSSVWAEDDIQFDSRFLELKGDTKIDLKRFSSQGYVEPGKYNLQVQLNKQPLAEEYD IYWYAGEDDVSKSYACLTPELVAQFGLKEDVAKNLQWSHDGKCLKPGQLEGMEIKADLSQSALVISLPQAYLEYTWPDWD PPSRWDDGISGIIADYSITAQTRHEENGGDDSNEISGNGTVGVNLGPWRMRADWQTNYQHTRSNDDDEEFSGDDTQKKWE WSRYYAWRALPSLKAKLALGEDYLNSDIFDGFNYVGGSVSTDDQMLPPNLRGYAPDISGVAHTTAKVTVSQMGRVIYETQ VPAGPFRIQDLGDSISGTLHVRIEEQNGQVQEYDISTASMPYLTRPGQVRYKIMMGRPQEWGHHVEGGFFSGAEASWGIA NGWSLYGGALGDENYQSAALGVGRDLSTFGAVAFDVTHSHTKLDKDTAYGKGSLDGNSFRVSYSKDFDQLNSRVTFAGYR FSEENFMTMSEYLDASDSEMVRTGNDKEMYTATYNQNFRDAGVSVYLNYTRHTYWDREEQTNYNIMLSHYFNMGSIRNMS VSLTGYRYEYDNRADKGMYISLSMPWGDNSTVSYNGNYGSGTDSSQVGYFSRVDDATHYQLNVGTSDKHTSVDSYYSHDG SLAQVDLSANYHEGQYTSAGLSLQGGATLTTHGGALHRTQNMGGTRLLIDADGVADVPVEGNGAAVYTNMFGKAVVSDVN NYYRNQAYIDLNKLPENAETTQSVVQATLTEGAIGYRKFAVISGQKAMAVLRLQDGSHPPFGAEVKNDNEQTVGLVDDDG NVYLAGVKPGEHMSVFWSGVAHCDINLPDPLPADLFNGLLLPCQHKGNVAPVVPDDIKPVIQEQTQQVTPTDPPVSVSAN Q |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 6e-146 | 44 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 9e-145 | 44 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 7e-145 | 44 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 1e-145 | 44 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 1e-145 | 44 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 1e-145 | 44 |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 4e-151 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| UMNK88_2890 | YP_006134618.1 | outer membrane usher protein PapC | VFG1548 | Protein | 4e-146 | 44 |
| UMNK88_2890 | YP_006134618.1 | outer membrane usher protein PapC | VFG0884 | Protein | 4e-146 | 44 |
| UMNK88_2890 | YP_006134618.1 | outer membrane usher protein PapC | VFG0895 | Protein | 4e-146 | 44 |
