Gene Information

Name : galF (UMNK88_2587)
Accession : YP_006134320.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Virulence
Product : regulatory protein GalF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2464621 - 2465514 bp
Length : 894 bp
Strand : -
Note : -

DNA sequence :
ATGACGAATTTAAAAGCAGTTATTCCTGTAGCGGGTCTAGGGATGCATATGTTGCCTGCTACTAAGGCGATTCCCAAAGA
GATGCTACCGATCGTCGACAAGCCAATGATTCAGTACATTGTTGACGAGATTGTGGCTGCAGGGATCAAAGAAATCCTCC
TGGTAACTCACGCGTCCAAAAACGCGGTCGAAAACCACTTCGACACCTCTTATGAATTAGAATCTCTCCTTGAACTGCGC
GTGAAGCGTCAGCTGCTGGCGGAAGTACAGTCCATCTGTCCGCCGGGCGTGACCATTATGAACGTGCGTCAGGGCGAACC
TTTAGGTTTAGGCCACTCCATTTTGTGTGCACGACCCGCCATTGGTGACAACCCATTTGTTGTGGTATTGCCGGACGTTG
TGATCGACGACGCCAGTGCCGACCCGCTGCGCTACAACCTTGCTGCCATGATTGCGCGCTTCAATGAAACGGGCCGCAGC
CAGGTGCTGGCAAAACGTATGCCGGGTGACCTCTCTGAATACTCCGTCATTCAGACCAAAGAACCACTGGATCGTGAAGG
TAAAGTCAGCCGCATCGTCGAATTTATCGAAAAACCGGATCAGCCGCAGACGCTGGACTCAGACATCATGGCCGTTGGTC
GCTATGTGCTTTCTGCCGATATTTGGCCGGAACTGGAACGTACTCAGCCTGGTGCATGGGGACGTATTCAGCTGACTGAT
GCTATTGCCGAGCTGGCGAAAAAACAGTCCGTTGATGCCATGCTGATGACTGGGGACAGTTACGACTGCGGTAAAAAAAT
GGGTTATATGCAGGCATTTGTGAAGTATGGACTACGCAACCTCAAAGAAGGGGCGAAGTTCCGTAAAGGGATTGAGAAGC
TGTTAAGCGAATAA

Protein sequence :
MTNLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEIVAAGIKEILLVTHASKNAVENHFDTSYELESLLELR
VKRQLLAEVQSICPPGVTIMNVRQGEPLGLGHSILCARPAIGDNPFVVVLPDVVIDDASADPLRYNLAAMIARFNETGRS
QVLAKRMPGDLSEYSVIQTKEPLDREGKVSRIVEFIEKPDQPQTLDSDIMAVGRYVLSADIWPELERTQPGAWGRIQLTD
AIAELAKKQSVDAMLMTGDSYDCGKKMGYMQAFVKYGLRNLKEGAKFRKGIEKLLSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 5e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
galF YP_006134320.1 regulatory protein GalF VFG0964 Protein 3e-48 43