Gene Information

Name : UMNK88_2544 (UMNK88_2544)
Accession : YP_006134278.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2429200 - 2430021 bp
Length : 822 bp
Strand : +
Note : -

DNA sequence :
ATGCGATTAGCCAGTCGTTTTGGTTATGCTGCAAACCAGATACGCCGTGACCGTCCGCTGACACATGAAGAACTGATACG
CCATGTACCCAGTATTTTTGGGGAAGACCGGCACACCTCCCGCAGTGAACGGTATGCGTACATTCCCACCATTACCGTCC
TGGAAAATCTGCAGCGGGAAGGCTTTCAGCCGTTCTTCGCCTGCCAGACCCGTGTGCGCGACCCGGGCCGCCGGGGATAC
ACAAAACACATGCTGCGTCTGCGGCGGGCCGGAGAGATAAACGGAGAACATGTCCCTGAAATTATTCTGCTCAACTCTCA
TGACGGTACCTCCAGCTACCAGATGCTGCCGGGTTACTTCAGGTTCGTCTGCCAGAACGGGTGCGTCTGTGGCCAGTCTC
TGGGGGAAGTGCGTGTTCCACACCGGGGAAATGTAGTGGAGAAAGTTATCGAAGGGGCTTACGAGGTGGTGGGCGTGTTT
GACCGGATAGAGGAGAAGCGTGATGCCATGCAGTCGCTGGTCCTGCCGCCACCGGCACGCCAGGCGCTGGCACAGGCGGC
ACTGACTTACCGTTATGGTGACGAACATCAGCCCGTCACCACCGCCGACATTCTGACGCCGCGACGCCGGGAGGATTACG
GTAAGGACCTGTGGAGCGCATATCAGACCATCCAGGAGAATATGCTGAAAGGCGGGATTTCCGGTCGCAGTGCAAAAGGA
AAACGTATCCATACCCGGGCCATTCACAGCATTGATACCGACATTAAGCTCAATCGCGCATTGTGGGTGATGGCAGAAAC
GATGCTGGAGAGCCTGCGCTGA

Protein sequence :
MRLASRFGYAANQIRRDRPLTHEELIRHVPSIFGEDRHTSRSERYAYIPTITVLENLQREGFQPFFACQTRVRDPGRRGY
TKHMLRLRRAGEINGEHVPEIILLNSHDGTSSYQMLPGYFRFVCQNGCVCGQSLGEVRVPHRGNVVEKVIEGAYEVVGVF
DRIEEKRDAMQSLVLPPPARQALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWSAYQTIQENMLKGGISGRSAKG
KRIHTRAIHSIDTDIKLNRALWVMAETMLESLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 6e-116 96
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 8e-116 96
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 7e-116 95
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 3e-116 95
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 7e-116 95
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 3e-116 95
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 7e-116 95
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 7e-112 93
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 7e-112 93
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-112 93
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-112 93
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-112 93
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 2e-108 91
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 3e-109 91
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 1e-110 91
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 1e-73 56
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 2e-73 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMNK88_2544 YP_006134278.1 hypothetical protein VFG1676 Protein 3e-116 96
UMNK88_2544 YP_006134278.1 hypothetical protein VFG0658 Protein 1e-116 95
UMNK88_2544 YP_006134278.1 hypothetical protein VFG1526 Protein 2e-109 91
UMNK88_2544 YP_006134278.1 hypothetical protein VFG1615 Protein 1e-108 91