Gene Information

Name : UMNK88_2537 (UMNK88_2537)
Accession : YP_006134271.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2422279 - 2423151 bp
Length : 873 bp
Strand : +
Note : putative GTPase

DNA sequence :
ATGAATCCGTCTGATGCCATTGAGGCAATTGAAAAACCGCTCTCCTCCCTGCCTTACTCACTTTCCCGTCACATCCTGGA
ACATCTGCGCAAACTCACCAGTCACGAACCCGTGCCTGGCATTATGGGTAAAAGCGGGGCCGGTAAATCCTCACTCTGTA
ATGCGCTGTTTCAGGGGGAGGTCACCCCGGTCAGTGATGTTCACGCCGGCACCCGGGAAGTGCAGCGCTTCCGTCTGAAT
GGCCATGGTCACAGCATGGTTATCACTGACCTGCCCGGGGTGGGCGAGAGCCGGGACAGGGATGCAGAGTTTGAAGCCCT
GTACCGTGACATTCTGCTCGAACTGGACCTGGTACTGTGGCTGATTAAAGCCGATGACCGTGCCCTGTCTGTGGATGAGT
ATTTCTGGCGACACATCCTGCACCGGGGACATCAGCGGGTACTGTTTGTGGTGATGCAGGCCGATAAAACGGAGCCCTGC
CATGAATGGGATATGGCCGGTATTCAGCCTTCTCCCGCAGAGGCACAGAACATTCGCGAAAAAACGGAGGCGGTATTCCG
TCTGTTCCGGCCCGTACATCGGGTTGTTGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCA
TGACAGCACTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGCCTGCAGGACGAGCTGCGCACGGAGTCTGTCCGGTCT
CAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGCATTGCCTCTGTTGCACG
CACGGTTCTGCGCGCCGTCCGTGACTCGGTGGTCTCTGTTGCCCGCGCGGTATGGAACTGGATTTTCTTCTGA

Protein sequence :
MNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTSHEPVPGIMGKSGAGKSSLCNALFQGEVTPVSDVHAGTREVQRFRLN
GHGHSMVITDLPGVGESRDRDAEFEALYRDILLELDLVLWLIKADDRALSVDEYFWRHILHRGHQRVLFVVMQADKTEPC
HEWDMAGIQPSPAEAQNIREKTEAVFRLFRPVHRVVAVSARTGWELDTLVSALMTALPDHAASPLMTRLQDELRTESVRS
QAREQFTGAVDRIFDTAESVCIASVARTVLRAVRDSVVSVARAVWNWIFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1093 YP_853113.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 8e-115 99
unnamed AAL08471.1 unknown Not tested SRL Protein 2e-112 97
ECO103_3582 YP_003223441.1 hypothetical protein Not tested LEE Protein 3e-112 97
aec64 AAW51747.1 Aec64 Not tested AGI-3 Protein 7e-112 97
yeeP ADD91709.1 YeeP Not tested PAI-I AL862 Protein 7e-112 97
yeeP CAE85196.1 YeeP protein Not tested PAI V 536 Protein 2e-111 97
unnamed AAL99256.1 unknown Not tested LEE Protein 6e-110 96
unnamed CAD66199.1 hypothetical protein Not tested PAI III 536 Protein 2e-111 96
unnamed AAK00473.1 unknown Not tested SHI-1 Protein 4e-110 95
Z1210 NP_286745.1 histone Not tested TAI Protein 1e-109 95
Z1650 NP_287153.1 hypothetical protein Not tested TAI Protein 1e-109 95
sap NP_708764.1 hypothetical protein Not tested SHI-1 Protein 6e-110 95
sap NP_838477.1 hypothetical protein Not tested SHI-1 Protein 2e-110 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMNK88_2537 YP_006134271.1 hypothetical protein VFG1062 Protein 1e-112 97
UMNK88_2537 YP_006134271.1 hypothetical protein VFG1674 Protein 9e-112 96
UMNK88_2537 YP_006134271.1 hypothetical protein VFG0654 Protein 2e-110 95