Gene Information

Name : UMNK88_2529 (UMNK88_2529)
Accession : YP_006134263.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Unknown
Product : transposase InsF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2412993 - 2413859 bp
Length : 867 bp
Strand : +
Note : -

DNA sequence :
ATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAG
CGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCC
TCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTT
AACGTAAAAACCGTGGCGGCAAGCCTGCGCCGTCAGGGACTGAGGGCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTA
CCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGCCAG
GAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATT
GGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCC
CCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATC
TGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAA
TGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCG
GTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAG

Protein sequence :
MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPF
NVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWPGDITYLRTDEGWLYLAVVIDLWSRAVI
GWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVE
CIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENKNLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 1e-133 99
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 6e-134 99
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 6e-133 99
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 5e-113 86
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 7e-45 43
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 7e-45 43
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 7e-45 43
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 1e-44 43
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 1e-44 43
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 1e-44 42
unnamed AAF09030.1 unknown Not tested SHI-O Protein 1e-44 42
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 1e-44 42
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 2e-44 42
unnamed AAF09022.1 unknown Not tested SHI-O Protein 4e-45 42
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 2e-44 42
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 1e-44 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMNK88_2529 YP_006134263.1 transposase InsF VFG1631 Protein 3e-113 86
UMNK88_2529 YP_006134263.1 transposase InsF VFG1706 Protein 8e-45 42