Gene Information

Name : UMNK88_2521 (UMNK88_2521)
Accession : YP_006134257.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2408130 - 2409011 bp
Length : 882 bp
Strand : -
Note : putative transposase

DNA sequence :
ATGGATAGCGCATGTGCCCTTGTTACCTTCGGACAAGGAATAGCCCCGGTAAGCCGTGTTCTGGGCGTGTCACGTGCGCA
GTTAACATTACGGATGAAGGCATCGGATAACAAGCCAGATAAACGGCGTCAGAGACGCGATGAGGCTGCGGATGCAGAAG
TCTTATCGCGCATCCTGGATATCATTGGCGATATGCCAGCATATGGGTATCGCCGTGTCTGGGCGATACTCAGACGGCAG
TCCCGAAATGAAGGCTTGCCGTTCGTGAATGCAAAGCGCGTTTACCGAATAATGAGCGAAAACAGCCTGTTGTTGTTACA
TGACAAACCATCACGGCTGCAGCGGGAACATAAAGGCCGAATATCGGTGAAGGAAAGCGACCAGCGTTGGTGTTCTGATG
GCTTCGAGTTCGGTTGTGATGATGGCGAAAAAGTGCGTGTTACGTTCGTCCTGGACTGTTGCGATCGTGAAGCCATAGAC
TGGGCCGCAAGCACGGGAGGTTACGATAAAGCGACAGTGCAGGATGTGATGTTAGGAGCGATAGAAAAACGCTTTGGCGA
TAAAGTACCGGAACAGTCGATCCAGTGGCTGACAGATAACGGTTCAGCGTACAGAGCGCATGAAACACGGCAGTTCGCCA
GAGAGCTGAATCTGGAGCCCTGCACAACGGCAATCAGTAGTCCTCAGAGTAATGGAATGGCAGAACGGTTCGTGAAAACG
ATAAAGGAAGACTACATCGCGTTCATGCCGAAACCGAATGTAAGAACGGCATTGCATAACCTTGCAGTGGCGATCGAGCA
TTACAATGAAAACCATCCGCATAGTGCGTTGGGTTATCGCTCTCCGCGAGAATATCGACGTCAGCGGGTAATGTTAACTT
AA

Protein sequence :
MDSACALVTFGQGIAPVSRVLGVSRAQLTLRMKASDNKPDKRRQRRDEAADAEVLSRILDIIGDMPAYGYRRVWAILRRQ
SRNEGLPFVNAKRVYRIMSENSLLLLHDKPSRLQREHKGRISVKESDQRWCSDGFEFGCDDGEKVRVTFVLDCCDREAID
WAASTGGYDKATVQDVMLGAIEKRFGDKVPEQSIQWLTDNGSAYRAHETRQFARELNLEPCTTAISSPQSNGMAERFVKT
IKEDYIAFMPKPNVRTALHNLAVAIEHYNENHPHSALGYRSPREYRRQRVMLT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insD YP_854263.1 IS2 transposase Not tested PAI I APEC-O1 Protein 1e-99 98
insD AAZ04432.1 IS2 transposase Not tested PAI I APEC-O1 Protein 9e-100 98
c5197 NP_757045.1 transposase insD Not tested PAI II CFT073 Protein 1e-88 97
unnamed CAC39283.1 hypothetical protein Not tested LPA Protein 1e-118 90
unnamed AAL67379.1 transposase-like protein Not tested PAI II CFT073 Protein 9e-78 67
SF2985 NP_708759.1 insertion element IS2 transposase InsD Not tested SHI-1 Protein 1e-77 66
unnamed CAC39284.1 hypothetical protein Not tested LPA Protein 2e-77 66
tnpF AAD44739.1 TnpF Not tested SHI-2 Protein 1e-77 66
ECO111_3773 YP_003236109.1 putative IS2 transposase InsAB Not tested LEE Protein 9e-76 65
aec49 AAW51732.1 Aec49 Not tested AGI-3 Protein 3e-80 62
S3189 NP_838472.2 insertion element IS2 transposase InsD Not tested SHI-1 Protein 1e-80 62
S4050 NP_839218.2 insertion element IS2 transposase InsD Not tested SHI-2 Protein 2e-81 62
SF3708 NP_709447.1 IS2 transposase TnpB Not tested SHI-2 Protein 2e-81 62
SF3721 NP_709460.1 IS2 transposase TnpB Not tested SHI-2 Protein 2e-81 62
insD YP_002414033.1 insertion element IS2 transposase InsD Not tested Not named Protein 1e-81 62
S4061 NP_839230.2 insertion element IS2 transposase InsD Not tested SHI-2 Protein 7e-82 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMNK88_2521 YP_006134257.1 hypothetical protein VFG0649 Protein 6e-78 66
UMNK88_2521 YP_006134257.1 hypothetical protein VFG0621 Protein 7e-82 62
UMNK88_2521 YP_006134257.1 hypothetical protein VFG0608 Protein 7e-82 62
UMNK88_2521 YP_006134257.1 hypothetical protein VFG1732 Protein 4e-82 62