Gene Information

Name : UMNK88_242 (UMNK88_242)
Accession : YP_006132059.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 261902 - 262402 bp
Length : 501 bp
Strand : -
Note : putative type IV secretion system protein

DNA sequence : 
ATGAGCAAAAAATTTGAAGGCAGCGTCGCGCCTCGCGAACGTATTAATATATCGTATGTCCCAAAAACAGATGGCCAGAC
GGCTGAAGTGGAACTTCCGCTTAACATGCTCGTTGTCGGCGATACCGGAAATACGCAGGAAACATCCTCACTGGATGAAC
GTCAGGCAGTTTCCGTTAACAAGCACAATTTCGGTGCAGTGATGGCTGAAGCAGCCATTGGCCTCAATTTTACCGTCCCC
GCCACGCTGAAGGGAAGCACAACGGACGATGAGCTGAATGTGGCGCTGAATATCAAGTCACTGGATGATTTTTCACCAGA
TAGCGTGGCCCGGCAGGTTCCGGAAGTGAATAAATTGCTGGAACTGCGTGAAGCACTGACTGCACTGAAGGGGCCGATGG
GTAACCTTCCGGCATTCCGTACCCAGCTCCAGGCATTGCTGGAAAATGAAGAGTCCCGCGAGCAGTTGCTCAAAGAAATC
GGCCAGGTGAGCAATAAATAA

Protein sequence : 
MSKKFEGSVAPRERINISYVPKTDGQTAEVELPLNMLVVGDTGNTQETSSLDERQAVSVNKHNFGAVMAEAAIGLNFTVP
ATLKGSTTDDELNVALNIKSLDDFSPDSVARQVPEVNKLLELREALTALKGPMGNLPAFRTQLQALLENEESREQLLKEI
GQVSNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec17 YP_851427.1 hypothetical protein Not tested PAI II APEC-O1 Protein 2e-42 54
aec17 AAQ96711.1 Aec17 Not tested AGI-1 Protein 2e-42 54
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 4e-36 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMNK88_242 YP_006132059.1 hypothetical protein VFG2092 Protein 6e-40 59
UMNK88_242 YP_006132059.1 hypothetical protein VFG2474 Protein 3e-33 44