Gene Information

Name : UMNK88_2413 (UMNK88_2413)
Accession : YP_006134159.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Resistance
Product : multidrug transporter EmrE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2319363 - 2319695 bp
Length : 333 bp
Strand : -
Note : -

DNA sequence :
ATGAACCCTTATATTTATCTTGGTGGCGCAATACTTGCAGAGGTCATTGGTACAACCTTAATGAAGTTTTCAGAGGGGTT
TACACGGTTATGGCCCTCTGTTGGCACAATTATTTGCTATTGTGCATCATTTTGGTTATTAGCTCAGACACTGGCTTATA
TACCTACAGGGATTGCTTATGCTATCTGGTCAGGAGTCGGTATCGTTCTGATTAGTTTGCTTTCCTGGGGATTTTTTGGC
CAACGACTGGACTTGCCAGCCATCATAGGCATGATGTTGATTTGTGCCGGTGTGTTAGTCATTAACTTGTTGTCACGAAG
CGCACCGCATTAA

Protein sequence :
MNPYIYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFG
QRLDLPAIIGMMLICAGVLVINLLSRSAPH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
qacEdelta1 YP_005797134.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 6e-13 46
qacEdelta1 AGK07074.1 QacEdelta1 Not tested SGI1 Protein 4e-13 46
qacE-delta1 AFG30112.1 QacE-delta1 Not tested PAGI-2 Protein 4e-13 46
qacEdelta1 CAJ77030.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 4e-13 46
qacEdelta1 YP_005797150.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 6e-13 46
qacEdelta1 AGK07100.1 QacEdelta1 Not tested SGI1 Protein 4e-13 46
qacEdelta1 AGF34989.1 QacEdelta1 Not tested SGI1 Protein 4e-13 46
qacEdelta1 CAJ77049.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 4e-13 46
ebr YP_006098377.1 putative ethidium bromide resistance protein Not tested Tn2411 Protein 6e-13 46
qacEdelta1 AGK07109.1 QacEdelta1 Not tested SGI1 Protein 4e-13 46
qacEdelta1 AGF35028.1 QacEdelta1 Not tested SGI1 Protein 4e-13 46
qacEdelta1 CAJ77052.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 4e-13 46
qacEdelta1 ACN81026.1 QacEdelta1 Not tested AbaR5 Protein 6e-13 46
qacEdelta1 AFV53123.1 QacEdelta1 multidrug exporter Not tested AbGRI2-1 Protein 4e-13 46
qacEdelta1 AGF35063.1 QacEdelta1 Not tested SGI1 Protein 4e-13 46
qacEdelta1 CAJ77088.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 4e-13 46
qacEdelta1 AAK02047.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 4e-13 46
qacEdelta1 AGK36647.1 QacEdelta1 Not tested AbaR26 Protein 4e-13 46
qacEdelta1 AGK06933.1 QacEdelta1 Not tested SGI1 Protein 4e-13 46
qacE-deltal ACF06159.1 quartenary ammonium compound resistance protein Not tested Tn5036-like Protein 4e-13 46
qacEdelta1 AAK02056.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 4e-13 46
qacEdelta1 AGK06970.1 QacEdelta1 Not tested SGI1 Protein 4e-13 46
qacE-delta1 ACY75523.1 QacE-delta1 Not tested Tn6060 Protein 4e-13 46
qacEdelta1 ABB48428.1 QacEdelta1 Not tested SGI1 Protein 4e-13 46
qacEdelta1 AGK06979.1 QacEdelta1 Not tested SGI1 Protein 4e-13 46
qacE-delta1 ACY75532.1 QacE-delta1 Not tested Tn6060 Protein 4e-13 46
qacEdelta1 ABZ01839.1 QacEdelta1 Not tested SGI2 Protein 4e-13 46
ACICU_00227 YP_001844886.1 membrane transporter Not tested AbaR20 Protein 6e-13 46
qacEdelta1 AGK07016.1 QacEdelta1 Not tested SGI1 Protein 4e-13 46
qacE-delta1 AET25389.1 QacE-delta1 Not tested PAGI-2(C) Protein 4e-13 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMNK88_2413 YP_006134159.1 multidrug transporter EmrE NC_002695.1.913273.p Protein 4e-46 99
UMNK88_2413 YP_006134159.1 multidrug transporter EmrE BAC0150 Protein 4e-46 99
UMNK88_2413 YP_006134159.1 multidrug transporter EmrE CP004022.1.gene1549. Protein 5e-24 59
UMNK88_2413 YP_006134159.1 multidrug transporter EmrE CP001138.1.gene1489. Protein 3e-24 59
UMNK88_2413 YP_006134159.1 multidrug transporter EmrE BAC0377 Protein 2e-22 56
UMNK88_2413 YP_006134159.1 multidrug transporter EmrE NC_010410.6003348.p0 Protein 3e-19 51
UMNK88_2413 YP_006134159.1 multidrug transporter EmrE BAC0002 Protein 3e-19 51
UMNK88_2413 YP_006134159.1 multidrug transporter EmrE BAC0324 Protein 3e-19 50
UMNK88_2413 YP_006134159.1 multidrug transporter EmrE BAC0322 Protein 6e-18 48
UMNK88_2413 YP_006134159.1 multidrug transporter EmrE BAC0323 Protein 2e-13 46
UMNK88_2413 YP_006134159.1 multidrug transporter EmrE AE000516.2.gene3301. Protein 3e-11 45
UMNK88_2413 YP_006134159.1 multidrug transporter EmrE BAC0249 Protein 3e-11 45
UMNK88_2413 YP_006134159.1 multidrug transporter EmrE BAC0327 Protein 4e-15 43
UMNK88_2413 YP_006134159.1 multidrug transporter EmrE BAC0321 Protein 7e-17 42
UMNK88_2413 YP_006134159.1 multidrug transporter EmrE BAC0140 Protein 2e-14 42
UMNK88_2413 YP_006134159.1 multidrug transporter EmrE BAC0325 Protein 5e-13 41