Gene Information

Name : UMNK88_1924 (UMNK88_1924)
Accession : YP_006133684.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Unknown
Product : transposase InsF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1853177 - 1853992 bp
Length : 816 bp
Strand : +
Note : -

DNA sequence :
ATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAG
CGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCC
TCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTT
AACGTAAAAACCGTGGCGGCAAGCCTGCGCCGTCAGGGACTGAGGGCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTA
CCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAG
GAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATT
GGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCC
CCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATC
TGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAA
TGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTCAGTTCATTCATTCCATAAATTGTGG
CGAACATGACCGGTAG

Protein sequence :
MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPF
NVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVI
GWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVE
CIHGEHFISREIMRATVFQFIHSINCGEHDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 2e-120 99
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 2e-120 99
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 8e-120 99
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 2e-101 85
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 6e-43 42
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 6e-43 42
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 6e-43 42
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 1e-39 41
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 1e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMNK88_1924 YP_006133684.1 transposase InsF VFG1631 Protein 1e-101 85