Gene Information

Name : UMNK88_1293 (UMNK88_1293)
Accession : YP_006133069.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1277326 - 1278168 bp
Length : 843 bp
Strand : +
Note : -

DNA sequence :
ATGTCTGATATCACAGCCTCCCGTCCGGAAGTGGTCAACGGGCATACGGACGTTATCTGCTCAACCAGTATCCGCCACAT
TCTGACTGTACGAAAGAGTACGCTGCTGCAAATCGACACACTTATCCGGCAACTGGCTGAAATCTCAGCAATGACAGAAA
GTATTGGCGGTAAAACCGCACTGGACTGGGCGATGAAACAGGATTTTCGCTGTGGCTGCTGGCTGATGGAAAAACCGGAA
GCAGCAATGAAAGCCATCACCCGCAATCTCGATCGAGAAATCTGGCGTGACCTGATGCAACGTTCCGGGATGCTGTCATT
AATGGATGCGCAGGCCCGTGATACATGGTACCGGTCACTGGAGTACGATAATTTTCCGGAAATCAGCGAAGCGAACATCC
TGAGCACATTTGAACAACTGCACCAGAATAAGGATGAGGTGTTTGAGCGAGGGGTGATCAACGTCTTCAGAGGGTTGAGC
TGGAATTACAAAACCAACTCCCCCTGTAAATTTGGTAATAAAATTATCGTCAACAATCTGGTGAGATGGGACCGGTGGGG
ATTTCATCTGAACAGCGGGCAACAGGCAGATCGACTTGCCGACCTGGAAAGAATGCTGCACCTGTTCAGCGGCAAACCAA
TCCCCGACAACCGGGGAAACATCACCCTTCGTCTGGATGATCACATTCAGTCTGTTCAGGGTAAAGAGAGCTATGAAGAT
GAGATGTTCAGCATCAGATACTTTAAGAAGGGCTCCGCACACATCACGTTCAGGAAACCAGAACTGGTTGACAGACTGAA
TGATATTATCGCAAAACACTATCCTGACATGCTGGCAGTATAG

Protein sequence :
MSDITASRPEVVNGHTDVICSTSIRHILTVRKSTLLQIDTLIRQLAEISAMTESIGGKTALDWAMKQDFRCGCWLMEKPE
AAMKAITRNLDREIWRDLMQRSGMLSLMDAQARDTWYRSLEYDNFPEISEANILSTFEQLHQNKDEVFERGVINVFRGLS
WNYKTNSPCKFGNKIIVNNLVRWDRWGFHLNSGQQADRLADLERMLHLFSGKPIPDNRGNITLRLDDHIQSVQGKESYED
EMFSIRYFKKGSAHITFRKPELVDRLNDIIAKHYPDMLAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 4e-127 96
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 4e-127 96
unnamed AAL57572.1 unknown Not tested LEE Protein 7e-123 93
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 5e-122 93
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 2e-124 93
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 6e-122 90
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 1e-120 89
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 3e-121 89
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 1e-120 89
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 4e-121 89
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 4e-121 89
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-120 89
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 5e-120 89
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 7e-120 88
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 4e-110 88

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMNK88_1293 YP_006133069.1 hypothetical protein VFG1533 Protein 1e-124 93
UMNK88_1293 YP_006133069.1 hypothetical protein VFG0666 Protein 2e-121 89
UMNK88_1293 YP_006133069.1 hypothetical protein VFG1685 Protein 2e-110 88