Gene Information

Name : UMNK88_1291 (UMNK88_1291)
Accession : YP_006133068.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1277044 - 1277241 bp
Length : 198 bp
Strand : +
Note : -

DNA sequence :
ATGAAATCATTAACCACGGAAACCGCACTGGATATTCTGATTGCGTGGCTACAGGACAATATCGACTGCGAATCGGGAAT
TATCTTTGACAACGATGAGGATAAAACGGATTCGGCAGCACTGCTGCCCTGCATTGAACAGGCCAGGGAGGATATCCGTA
CCCTGCGCCAGTTGCAGTTTCTGCAACAGAACCAGTGA

Protein sequence :
MKSLTTETALDILIAWLQDNIDCESGIIFDNDEDKTDSAALLPCIEQAREDIRTLRQLQFLQQNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66209.1 hypothetical protein Not tested PAI III 536 Protein 1e-22 99
SF3001 NP_708775.1 hypothetical protein Not tested SHI-1 Protein 3e-22 97
unnamed AAK00484.1 unknown Not tested SHI-1 Protein 2e-22 97
z1225 CAD33791.1 Z1225 protein Not tested PAI I 536 Protein 6e-23 97
ECO103_3594 YP_003223451.1 hypothetical protein Not tested LEE Protein 4e-21 94
ECO111_3780 YP_003236115.1 hypothetical protein Not tested LEE Protein 5e-22 93
unnamed CAI43850.1 hypothetical protein Not tested LEE Protein 2e-21 93
unnamed ADD91697.1 hypothetical conserved protein Not tested PAI-I AL862 Protein 2e-21 93
Z1225 NP_286759.1 hypothetical protein Not tested TAI Protein 9e-22 91
unnamed AAL08480.1 unknown Not tested SRL Protein 6e-22 91
Z1663 NP_287165.1 hypothetical protein Not tested TAI Protein 7e-22 91
unnamed CAE85206.1 hypothetical protein Not tested PAI V 536 Protein 7e-22 91
c5147 NP_756995.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-21 90
unnamed AAL67387.1 L0009-like protein Not tested PAI II CFT073 Protein 1e-21 90
unnamed CAD42103.1 hypothetical protein Not tested PAI II 536 Protein 2e-21 90
unnamed AAC31488.1 L0009 Not tested LEE Protein 2e-16 89
Z5093 NP_290244.1 hypothetical protein Not tested LEE Protein 4e-16 89
unnamed ACU09435.1 conserved hypothetical protein Not tested LEE Protein 2e-16 89
ECs4541 NP_312568.1 hypothetical protein Not tested LEE Protein 4e-16 89

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMNK88_1291 YP_006133068.1 hypothetical protein VFG1684 Protein 6e-23 99
UMNK88_1291 YP_006133068.1 hypothetical protein VFG0665 Protein 1e-22 97
UMNK88_1291 YP_006133068.1 hypothetical protein VFG1532 Protein 3e-23 97
UMNK88_1291 YP_006133068.1 hypothetical protein VFG1071 Protein 3e-22 91
UMNK88_1291 YP_006133068.1 hypothetical protein VFG1622 Protein 8e-22 90
UMNK88_1291 YP_006133068.1 hypothetical protein VFG0788 Protein 1e-16 89