Gene Information

Name : UMNK88_1282 (UMNK88_1282)
Accession : YP_006133059.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1272820 - 1273638 bp
Length : 819 bp
Strand : +
Note : -

DNA sequence :
ATGCGATTAGCCAGTCGTTTTGGTTATACAAACCAGATACGCCGTGAACGTCCACTGACACATGAAGAGCTGATGCACTA
TGTTCCCAGTATTTTTGGAGAAGACCGGCATACCTCCCGCAGTGAACGCTATGCGTACATTCCCACCATCACCGTACTGG
AAAGTCTGCAGCGGGAAGGCTTTCAGCCATTCTTCGCCTGCCAGACACGTGTGCGTGACCCGGGTCGCCGGGAATACACA
AAACACATGCTGCGTCTGCGGCGTGACGGGGAGATAACCGGACAACATGTCCCTGAAATTATTCTGCTCAACTCCCATGA
CGGTACCTCCAGCTACCAGATGCTGCCGGGTTACTTCAGATTCGTCTGCCAGAACGGCTGCGTCTGTGGTCAGTCTCTGG
GGGAAGTGCGTGTTCCGCACCGGGGAAACGTGGTGGAGAAAGTTATTGAAGGGGCTTACGAAGTGGTGGGCGTGTTTGAC
CGGATTGAGGAGAAACGTGATGCCATGCAGTCGCTGGTCCTGCCGCCACCGGCACGCCAGGCACTGGCGCAGGCGGCACT
GACTTACCGTTATGGTGACGAACATCAGCCCGTCACCACTGCTGACATTCTGACACCACGACGCAGGGAGGATTACGGCA
AGGACCTGTGGAGCGCATATCAGACCATCCAGGAGAATATGCTGAAAGGCGGAATTTCCGGTCGCAGTGCCAGAGGAAAA
CGTATCCACACCCGGGCCATTCACAGCATCGACACCGACATTAAGCTCAATCGCGCATTGTGGGTGATGGCAGAAACGCT
GCTGGAGAGCATGCGCTGA

Protein sequence :
MRLASRFGYTNQIRRERPLTHEELMHYVPSIFGEDRHTSRSERYAYIPTITVLESLQREGFQPFFACQTRVRDPGRREYT
KHMLRLRRDGEITGQHVPEIILLNSHDGTSSYQMLPGYFRFVCQNGCVCGQSLGEVRVPHRGNVVEKVIEGAYEVVGVFD
RIEEKRDAMQSLVLPPPARQALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWSAYQTIQENMLKGGISGRSARGK
RIHTRAIHSIDTDIKLNRALWVMAETLLESMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 9e-118 96
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 8e-116 95
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 1e-117 95
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 1e-117 95
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 1e-117 95
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 9e-112 94
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-114 94
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-114 94
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-114 94
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 3e-116 94
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 3e-116 94
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 5e-113 93
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 1e-112 93
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 1e-112 93
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 4e-110 92
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 8e-73 55
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 6e-72 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMNK88_1282 YP_006133059.1 hypothetical protein VFG1676 Protein 5e-116 95
UMNK88_1282 YP_006133059.1 hypothetical protein VFG1526 Protein 5e-112 94
UMNK88_1282 YP_006133059.1 hypothetical protein VFG0658 Protein 1e-116 94
UMNK88_1282 YP_006133059.1 hypothetical protein VFG1615 Protein 2e-110 92