Gene Information

Name : UMNK88_1269 (UMNK88_1269)
Accession : YP_006133048.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1259587 - 1259934 bp
Length : 348 bp
Strand : -
Note : putative transposase

DNA sequence :
ATGATATCTCTCCCTGCCGGTTCGCGTATCTGGCTGGTTGCCGGTATCACCGATATGCGAAATGGCTTTAACGGCCTGGC
CTCAAAAGTTCAGAACGTCCTGAAGGATGACCCGTTCTCCGGGCATCTGTTCATCTTCCGCGGACGCCGGGGTGACCAGA
TAAAAGTGCTGTGGGCTGACAGTGACGGACTGTGCCTCTTCACCAAACGCCTGGAGCGGGGCCGCTTCGTCTGGCCGGTC
ACCCGCGATGGAAAGGTTCACCTTACTCCGGCTCAGTTGTCCATGCTTCTCGAAGGCATCGACTGGAAGCACCCGAAACG
AACGGAACGCGCTGGCATCCGCATATAA

Protein sequence :
MISLPAGSRIWLVAGITDMRNGFNGLASKVQNVLKDDPFSGHLFIFRGRRGDQIKVLWADSDGLCLFTKRLERGRFVWPV
TRDGKVHLTPAQLSMLLEGIDWKHPKRTERAGIRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 1e-49 99
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 5e-50 99
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 5e-50 99
ECO103_3553 YP_003223420.1 hypothetical protein Not tested LEE Protein 5e-45 82
Z4316 NP_289542.1 hypothetical protein Not tested OI-122 Protein 5e-45 82
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 9e-40 78
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 9e-40 78
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 3e-39 77
unnamed AAC31493.1 L0014 Not tested LEE Protein 2e-39 77
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 3e-39 77
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 2e-39 77
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 3e-39 77
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 2e-38 77
unnamed AAL99258.1 unknown Not tested LEE Protein 2e-39 77
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 2e-38 77
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 2e-39 77
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-39 77
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 2e-30 76
unnamed AAL08461.1 unknown Not tested SRL Protein 4e-39 76
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 9e-39 71
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 9e-39 71
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 6e-38 70
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 6e-38 70
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 1e-38 70
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 1e-30 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMNK88_1269 YP_006133048.1 hypothetical protein VFG1665 Protein 4e-50 99
UMNK88_1269 YP_006133048.1 hypothetical protein VFG1698 Protein 2e-40 78
UMNK88_1269 YP_006133048.1 hypothetical protein VFG0792 Protein 1e-39 77
UMNK88_1269 YP_006133048.1 hypothetical protein VFG1709 Protein 1e-39 77
UMNK88_1269 YP_006133048.1 hypothetical protein VFG1517 Protein 8e-31 76
UMNK88_1269 YP_006133048.1 hypothetical protein VFG1052 Protein 2e-39 76
UMNK88_1269 YP_006133048.1 hypothetical protein VFG1737 Protein 3e-39 70