Gene Information

Name : UMNK88_1261 (UMNK88_1261)
Accession : YP_006133040.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Virulence
Product : immunoglobulin-binding regulator protein IbrB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1254376 - 1255014 bp
Length : 639 bp
Strand : +
Note : -

DNA sequence :
ATGGGGGATTCTGTGACACCGGAGATAATTGGCAACATGATTCGTCAGTACTTCAGCCAGGAACGACCAGAAGAAGAGAC
CATACAGGCCCTTAATCACCTGCGCAGAGTGCTTCATGAAGTCAGTCCTTTTGCACATGAGCCAGTGGACTGTGTGCTGT
GGGTAAAAGCAGATGAGGTGGTGGCCAATGATTACAATCCTAATGTCATGGCGCCGGGTGAGAAGAAACTGCTGAAGCAG
TCACTGGAGAAAGATGGTTTCACACAACCGGTGGTGGTGTCTGAGGAAAAGAACCATTACCTGGTGGTGGATGGTTTTCA
TCGCCAGGTGCTGGGCAGGGAAGCAGGTACGGGAAAACGTCTGAAGGGCTGGCTGCCGGTGGTCTGTATTAATCCGGAGA
GAAAGGGACAGGCCTCACGTATTGCTGCGACCATCCGACATAACCGGGCCAGGGGCAAACATCAGATAACCTCAATGTCT
GATATTGTCAGGGACCTGTCGCGCCTGGGCTGGACGAATGAACGCATTGGTACGGAGCTGGGTATGGACCAGGATGAAGT
TCTCAGATTGAAACAGATTAGCGGGCTGACGGAGCTGTTTCAGGAAGAGGATTTCAGCCCGGCATGGACGGTTCGCTGA

Protein sequence :
MGDSVTPEIIGNMIRQYFSQERPEEETIQALNHLRRVLHEVSPFAHEPVDCVLWVKADEVVANDYNPNVMAPGEKKLLKQ
SLEKDGFTQPVVVSEEKNHYLVVDGFHRQVLGREAGTGKRLKGWLPVVCINPERKGQASRIAATIRHNRARGKHQITSMS
DIVRDLSRLGWTNERIGTELGMDQDEVLRLKQISGLTELFQEEDFSPAWTVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 1e-98 100
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 1e-98 100
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 1e-97 99
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 1e-97 99
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 3e-91 91
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-77 91
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-77 91
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-77 91
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 3e-78 79
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 1e-80 79
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 7e-29 46
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 1e-28 46
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 4e-29 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMNK88_1261 YP_006133040.1 immunoglobulin-binding regulator protein IbrB VFG1505 Protein 1e-91 91