Gene Information

Name : UMNK88_1252 (UMNK88_1252)
Accession : YP_006133031.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1246819 - 1247442 bp
Length : 624 bp
Strand : +
Note : -

DNA sequence : 
ATGCGTACACGAATTGACTATCTGGCGGATAAATACTGTTTTACAGAACGGAACGAATCCCCCCGTCTTCGCCGGCAGTG
GCAGGATGTTCTGGAGGAGTGCCGGCAGACAGAGGCCGGGCCAGAAGAACGGTTGCGTATTGCACTGCTGAATGTGGATT
ACGTCACCAGTTTTGAACTGCCTTTTCGCTTGCTGCTTACCCGTACACCGCAATTGATTGCCGCGCTGCGTGAAGAATGG
GGCATCAGCCAGAAAAATGTGGTGTTTAACGATAAACGGTTTGGCTGCGTGTACAGCCTGAAGGCCAGCCTTTCTGGTGT
GCCGGATACATACCGGTATCATCTGTCTCACCGTATTCGTCGCGTGGTTGGGAATGAAAACACATCATTGCCATATCAGC
AGGTTGCCCGGGAAGTGAAAGCGCCCCGTGAACGGCTGAAGTATGCACTGGAGGCGGGTTTACTGGTGACTGCACTGGAC
GGCCTGTTCTGGTTTGGCAGTCAGCGTATTGCGGCTGATGTTCTGAGGCTGAGAAAGGCCGGAATGCCGGTGGTGACCAC
GACCGTGGAGGTGCACGATAACCTGACGGGAACAACCCGCAAAGTACCGGCATACCATCTCTGA

Protein sequence : 
MRTRIDYLADKYCFTERNESPRLRRQWQDVLEECRQTEAGPEERLRIALLNVDYVTSFELPFRLLLTRTPQLIAALREEW
GISQKNVVFNDKRFGCVYSLKASLSGVPDTYRYHLSHRIRRVVGNENTSLPYQQVAREVKAPRERLKYALEAGLLVTALD
GLFWFGSQRIAADVLRLRKAGMPVVTTTVEVHDNLTGTTRKVPAYHL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1195 NP_286730.1 hypothetical protein Not tested TAI Protein 8e-94 99
Z1635 NP_287138.1 hypothetical protein Not tested TAI Protein 8e-94 99
Z1635 AAQ19121.1 Z1635-like protein Not tested PAI I CL3 Protein 3e-92 98
unnamed ADD91729.1 hypothetical conserved protein Not tested PAI-I AL862 Protein 5e-91 96
unnamed CAD42058.1 hypothetical protein Not tested PAI II 536 Protein 5e-89 93

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMNK88_1252 YP_006133031.1 hypothetical protein VFG1577 Protein 2e-89 93