Gene Information

Name : UMNK88_1218 (UMNK88_1218)
Accession : YP_006132997.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1218714 - 1220327 bp
Length : 1614 bp
Strand : +
Note : putative transposase

DNA sequence :
ATGAGTCGGAAATACCTCATTCGTATCACTGAGCTGGAAAGGCTGCTCTCTGAGCAGGCTGAAGCCCTCCGTCAGAAAGA
TCAGCAACTGAGTCTGGTTGAAGAGACGGAGGCCTTCCTGCGCTCTGCACTGGCACGTGCCGAGGAAAAGATCGAAGAGG
AGGAGCGGGAAATAGAACATCTGAGGGCCCAGATAGAAAAACTGCGCCGGATGTTGTTCGGTACCCGTTCTGAAAAACTG
CAGCGTGAGGTTGAACAGGCTGAGGCCCAACTGAAACAACGCGAACAGGAAAGCGATCGTTACAGTGGGCGTGAGGATGA
CCCGCAGGTTCCCCGCCAGTTGCGACAGTCACGTCATCGTCGTCCGTTACCGGCACATCTTCCCCGTGAAATACACCGTC
TGGAGCCTGAAGAAAGTTGTTGCCCGGAGTGTGGCAGTGAGCTGGATTATCTGGGGGAAGTCAGTGCTGAGCAGCTGGAA
CTGGTGAGTAGCGCCCTGAAAGTGATCCGCACTGTTCGGGTAAAAAAAGCCTGTACAAAATGTGACTGTATAGTTGAAGC
GCCAGCGCCGTCCCGCCCGATAGAGCGCGGCATCGCGGGCTCCGGATTACTTGCCCGCGTGTTAACGGGAAAATACTGCG
AACACCTGCCACTGTATCGTCAGAGTGAAATCTTTGCCCGCCAGGGCATCGAACTGAGCCGGGCATTACTCTCCAACTGG
GTTGACGCATGTTGTCAGTTAATGACTCTGCTGAATGATACCCTGTACCGTTACGTGATGAACACCCGCAAGGTTCACAC
TGACGACACACCAGTAAAAGTGCTGGCACCGGGCAGAAAAAAGGCAAAAACAGGACGCATCTGGACGTATGTCCGGGATG
ACCGGAATGCGGGCTCATCAGAGCCACCGGCGGTCTGGTTCGCCTACTCACCAGACAGGCAGGGAAAACATCCGGTACAA
CACCTTCGTCCCTTCCGGGGTATCCTGCAGGCGGATGCGTTCAGCGGTTACGATCGGCTGTTCAGTGCAGAACGTGAAGG
TGGTGCACTGACAGAAGTTGCGTGCTGGGCCCATGCCCGGCGAAAAATCCACGATGTATACATCAGCAGCAAAAGTGCGA
CGGCAGAAGAAGCCCTGAAGCGAATCAGTGAACTGTACGCCATCGAGGATGAAATACGGGGATTACCGGAGTCAGAGCGT
CTTGCCGTCAGGCAGCAGCGAAGCAAAGTGTTACTGACGTCACTGCATGAATGGATGGTGGAGAAGAATGGTACGCTGTC
GAAAAAATCCAGACTGGGCGAAGCGTGCAGCTATGTACTGAATCAGTGGGATGCCCTCTGTTATTACAGTGATGACGGTC
TGGCGGAGGCGGATAATAATGCTGCGGAAAGAGCGCTTCGTGCAGTCTGTCTCGGAAAGAAAAACTTTATGTTCTTTGGC
AGCGATCACGGCGGCGAGCGTGGAGCACTGTTGTACGGGCTGATCGGCACCTGCCGTCTGAACGGTATCGATCCGGAAGC
GTATCTGCGCCATATCCTGAGCGTACTGCCAGAATGGCCTTCCAACCGAGTTGATGAACTCCTGCCATGGAACGTAGTAC
TCACCAATAAATAA

Protein sequence :
MSRKYLIRITELERLLSEQAEALRQKDQQLSLVEETEAFLRSALARAEEKIEEEEREIEHLRAQIEKLRRMLFGTRSEKL
QREVEQAEAQLKQREQESDRYSGREDDPQVPRQLRQSRHRRPLPAHLPREIHRLEPEESCCPECGSELDYLGEVSAEQLE
LVSSALKVIRTVRVKKACTKCDCIVEAPAPSRPIERGIAGSGLLARVLTGKYCEHLPLYRQSEIFARQGIELSRALLSNW
VDACCQLMTLLNDTLYRYVMNTRKVHTDDTPVKVLAPGRKKAKTGRIWTYVRDDRNAGSSEPPAVWFAYSPDRQGKHPVQ
HLRPFRGILQADAFSGYDRLFSAEREGGALTEVACWAHARRKIHDVYISSKSATAEEALKRISELYAIEDEIRGLPESER
LAVRQQRSKVLLTSLHEWMVEKNGTLSKKSRLGEACSYVLNQWDALCYYSDDGLAEADNNAAERALRAVCLGKKNFMFFG
SDHGGERGALLYGLIGTCRLNGIDPEAYLRHILSVLPEWPSNRVDELLPWNVVLTNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 0.0 100
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 0.0 100
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 0.0 95
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 3e-145 88
unnamed AAC31494.1 L0015 Not tested LEE Protein 9e-143 64
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 7e-142 64
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 7e-142 64
tnp AEA34686.1 transposase Not tested Not named Protein 6e-142 64
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 7e-142 64
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 5e-142 64
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 1e-142 64
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 1e-142 64
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 1e-142 64
unnamed AAL57570.1 unknown Not tested LEE Protein 9e-143 64
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 4e-142 64
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 5e-137 63
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 2e-105 54
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 2e-101 51
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 1e-90 49
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 2e-90 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMNK88_1218 YP_006132997.1 hypothetical protein VFG1736 Protein 7e-172 90
UMNK88_1218 YP_006132997.1 hypothetical protein VFG0793 Protein 5e-143 64