Gene Information

Name : UMNK88_1206 (UMNK88_1206)
Accession : YP_006132985.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1212446 - 1212712 bp
Length : 267 bp
Strand : -
Note : -

DNA sequence :
ATGAGCAGAAAAACCCAACGTTACTCTAAAGAGTTCAAAGCCGAAGCTGTCAGAACGGTTCTTGAAAATCAACTTTCGAT
CAGTGAAGGCGCTTCCCGATTATCTCTTCCTGAAGGCACTTTAGGACAATGGGTTACCGCCGCCAGAAAAGGGCTCGGTA
CTCCTGGTTCCCGCACGGTGGCTGAACTGGAATCTGAAATTCTGCAACTGCGTAAGGCGTTAAATGAAGCTCGCCTTGAG
CGAGATATATTAAAAAAGCAGCTGTAG

Protein sequence :
MSRKTQRYSKEFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLE
RDILKKQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 1e-33 100
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 1e-33 100
Z1150 NP_286685.1 hypothetical protein Not tested TAI Protein 2e-33 100
Z1589 NP_287093.1 hypothetical protein Not tested TAI Protein 2e-33 100
unnamed AAF09021.1 unknown Not tested SHI-O Protein 3e-33 99
unnamed AAF09029.1 unknown Not tested SHI-O Protein 3e-33 99
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 2e-33 99
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-33 99
EXB21 ABD94708.1 putative transposase Not tested ExoU island B Protein 3e-08 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMNK88_1206 YP_006132985.1 transposase VFG1707 Protein 7e-34 99