Gene Information

Name : UMNK88_1191 (UMNK88_1191)
Accession : YP_006132970.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Unknown
Product : transposase InsF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1201606 - 1202319 bp
Length : 714 bp
Strand : +
Note : -

DNA sequence :
GTGGCACATATCCGCACTCGCGAAACATATGGAACCCGGCGGCTCCAGACGGAGCTGGCAGAGAATGGCATCATCGTTGG
TCGTGACCGACTGGCACGTCTTCGTAAGGAGCTAAGGCTACGCTGTAAGCAGAAACGCAAGTTCAGGGCGACTACGAACT
CGAACCACAATCTGCCAGTTGCGCCAAATCTGCTGAACCAGACGTTCGCTCCTACAGCACCAAATCAGGTCTGGGTGGCG
GACCTGACGTATGTTGCCACACAGGAGGGATGGTTGTACCTCGCTGGCATCAAAGATGTTTATACGTGCGAAATTGTCGG
CTACGCCATGGGAGAGCGCATGACAAAAGAGCTGACAGGTAAAGCCCTGTTTATGGCGCTCAGGAGCCAGCGCCCACCTG
CCGGGCTAATCCACCACTCTGATCGAGGTTCACAGTACTGCGCATACGGTTACCGGGTCATACAGGAGCAGTTTGGTCTG
AAAACATCAATGTCGCGTAAAGGTAACTGTTACGACAACGCTCCGATGGAAAGCTTCTGGGGAACGCTGAAAAATGAGAG
CCTGAGCCACTATCGTTTTAAGAGCCGGGATGAGGCCATCTCAGTAATACGGGAATACATTGAGATTTTCTACAATCGTC
AGCGTCGTCACTCTCGTCTGGGGAATATATCCCCGGCAGCCTTCAGGGAAAAATATCATCAGATGGCTGCTTAA

Protein sequence :
MAHIRTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNSNHNLPVAPNLLNQTFAPTAPNQVWVA
DLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGSQYCAYGYRVIQEQFGL
KTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFKSRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 1e-96 99
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 1e-96 99
unnamed AAF09022.1 unknown Not tested SHI-O Protein 5e-96 98
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 5e-96 98
unnamed AAF09030.1 unknown Not tested SHI-O Protein 5e-96 98
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 5e-96 98
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 4e-96 98
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 5e-96 98
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 1e-94 97
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 2e-40 46
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-40 46
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-40 46
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 9e-37 44
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 1e-37 43
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 2e-37 43
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 3e-37 43
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 5e-23 41
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 5e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMNK88_1191 YP_006132970.1 transposase InsF VFG1706 Protein 2e-96 98
UMNK88_1191 YP_006132970.1 transposase InsF VFG1631 Protein 5e-37 44
UMNK88_1191 YP_006132970.1 transposase InsF VFG1484 Protein 3e-23 41