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Name : UMNK88_1095 (UMNK88_1095) Accession : YP_006132881.1 Strain : Escherichia coli UMNK88 Genome accession: NC_017641 Putative virulence/resistance : Virulence Product : outer membrane usher protein FimD Function : - COG functional category : - COG ID : - EC number : - Position : 1099276 - 1101831 bp Length : 2556 bp Strand : + Note : - DNA sequence : GTGCCATCGTTTATTGGTGGGCTGGTGGTGTTTGTGTCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGC CTTTTTCAAAGATGATCCCTCAATGGTGGCCGATTTGTCTCGTTTCGAAAAAGGACAAAAAATAACGCCAGGGGTTTATC GTGTCGATATTGTTCTGAATCAGACAATTGTAGATACGCGCAACGTCAATTTTGTTGAGTTAACGCCAGAGAAGGGGATT GCCGCCTGTTTGACGACTGAAAGCCTGGATGCAATGGGTGTGAATACTGATGCGTTTCCGGCTTTTAAACAACTGGACAA ACAAGAGTGTGCGCTATTGGCGGAGATTATTCCGGATGCCAGCGTAACTTTTAATGTGAATAAACTCCGTCTGGAAATTT CAGTACCGCAAATTGCTATAAAAAGTAACGCTCGTGGTTATGTCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTA TTACTGGGATATTCATTTAGCGGGGCTAACAGTATTCATAGCAGCGCAGACAGTGATTCTGGCGACAGTTATTTTCTGAA TTTAAACAGTGGCGTTAATTTAGGCCCATGGAGATTGCGCAACAATTCAACATGGAGTCGCAGTAGTGGCCAAACCGCAG AATGGAAGAATCTCAGCAGCTATTTGCAGCGGGCGGTTATTCCACTAAAAGGCGAACTGACCGTAGGTGATGATTATACT GCAGGCGATTTTTTCGATAGTGTCAGCTTTCGTGGTGTGCAGCTGGCGTCAGATGACAACATGCTGCCAGACAGCCTGAA AGGGTTTGCGCCTGTGGTGCGTGGTATCGCCAAAAGCAATGCCCAGATAACGATTAAGCAAAATGGTTACACCATTTACC AAACTTATGTATCGCCTGGTGCTTTTGAAATTAGTGATCTCTATTCCACGTCGTCGAGCGGTGATTTGTTAGTTGAAATC AAAGAAGCGGACGGCAGCGTCAATAGCTACAGCGTACCGTTTTCCAGCGTGCCATTACTCCAGCGTCAGGGGCGAATCAA ATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCAGGAGAGCAAATTTGCCCAGGCCACGTTGCAGT GGGGCGGACCGTGGGGAACGACATGGTATGGTGGTGGACAATATGCTGAATATTACCGTGCCGCCATGTTTGGTCTGGGA TTTAACCTTGGCGATTTCGGAGCAATTTCGTTCGATGCGACCCAGGCGAAGAGTACGCTGGCAGACCAAAGCGAACATAA AGGTCAGTCATATCGTTTTCTGTATGCCAAAACGCTCAACCAATTGGGCACTAATTTTCAATTGATGGGCTATCGCTATT CGACGTCGGGTTTCTACACCCTTTCCGACACCATGTATAAACATATGGATGGCTACGAATTTAATGACGGTGATGATGAA GATACGCCGATGTGGTCGCGTTATTACAATTTGTTTTACACCAAACGTGGCAAACTGCAGGTCAATATCTCCCAGCAATT AGGCGAGTACGGTTCGTTTTATTTAAGTGGTAGCCAGCAAACTTACTGGCATACCGATCAACAGGATCGGCTATTACAGT TTGGCTACAACACGCAAATTAAAGATCTCTCGCTGGGGGTTTCCTGGAACTACAGTAAGTCCCGTGGTCAACCTGATGCT GATCAGGTGTTTGCACTAAATTTTTCCCTGCCGCTCAATCTGTTGCTCCCCAGAAGTAATGATAGCTATACCAGGAAAAA AAATTACGCCTGGATGACCTCTAACACCAGTATCGATAACGAAGGGCACATTACACAAAACCTGGGTTTAACGGAGACAC TACTCGATGACGGTAACCTGAGCTACAGCGTGCAACAGGGATATAACAGCGAGGGGAAAACGGCTAATGGTAGCGCCAGC ATGGACTACAAAGGGGCGTTTGCAGATGCCCGAGTGGGCTACAACTACAGCGATAACGGCAGTCAACAACAACTGAACTA CGCTCTTTCAGGCAGTTTAGTTGCCCATTCACAGGGCATTACCCTGGGGCAATCGCTGGGGGAAACTAACGTTCTGATTG CAGCACCAGGCGCAGAGAATACTCGTGTGGCGAACAGCACCGGGCTGAAAACTGACTGGCGCGGATATACCGTTGTTCCT TATGCCACTTCTTATCGGGAAAATCGAATCGCACTTGATGCGGCGTCGTTAAAACGTAACGTGGATCTTGAAAATGCAGT AGTCAACGTGGTTCCCACCAAAGGGGCGTTGGTTCTGGCGGAGTTCAATGCCCATACGGGTGCAAGGGTATTAATGAAAA CATCAAAGCAGGGTATACCGCTGCGTTTTGGCGCGATAGCGACGCTGGACGGCGTACAGGCTAATAGCGGCATAATTGAT GATGATGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCTCCCGATCAAAT TTGTCATATCAATTACGAGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAA Protein sequence : MPSFIGGLVVFVSAAFNAQAETWFDPAFFKDDPSMVADLSRFEKGQKITPGVYRVDIVLNQTIVDTRNVNFVELTPEKGI AACLTTESLDAMGVNTDAFPAFKQLDKQECALLAEIIPDASVTFNVNKLRLEISVPQIAIKSNARGYVPPERWDEGINAL LLGYSFSGANSIHSSADSDSGDSYFLNLNSGVNLGPWRLRNNSTWSRSSGQTAEWKNLSSYLQRAVIPLKGELTVGDDYT AGDFFDSVSFRGVQLASDDNMLPDSLKGFAPVVRGIAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEI KEADGSVNSYSVPFSSVPLLQRQGRIKYAVTLAKYRTNSNEQQESKFAQATLQWGGPWGTTWYGGGQYAEYYRAAMFGLG FNLGDFGAISFDATQAKSTLADQSEHKGQSYRFLYAKTLNQLGTNFQLMGYRYSTSGFYTLSDTMYKHMDGYEFNDGDDE DTPMWSRYYNLFYTKRGKLQVNISQQLGEYGSFYLSGSQQTYWHTDQQDRLLQFGYNTQIKDLSLGVSWNYSKSRGQPDA DQVFALNFSLPLNLLLPRSNDSYTRKKNYAWMTSNTSIDNEGHITQNLGLTETLLDDGNLSYSVQQGYNSEGKTANGSAS MDYKGAFADARVGYNYSDNGSQQQLNYALSGSLVAHSQGITLGQSLGETNVLIAAPGAENTRVANSTGLKTDWRGYTVVP YATSYRENRIALDAASLKRNVDLENAVVNVVPTKGALVLAEFNAHTGARVLMKTSKQGIPLRFGAIATLDGVQANSGIID DDGSLYMAGLPAKGTISVRWGEAPDQICHINYELTEQQINSAITRMDAICR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 0.0 | 48 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 1e-180 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| UMNK88_1095 | YP_006132881.1 | outer membrane usher protein FimD | VFG0876 | Protein | 0.0 | 49 |
| UMNK88_1095 | YP_006132881.1 | outer membrane usher protein FimD | VFG0446 | Protein | 1e-179 | 49 |
| UMNK88_1095 | YP_006132881.1 | outer membrane usher protein FimD | VFG1645 | Protein | 0.0 | 46 |
| UMNK88_1095 | YP_006132881.1 | outer membrane usher protein FimD | VFG0912 | Protein | 1e-180 | 46 |
| UMNK88_1095 | YP_006132881.1 | outer membrane usher protein FimD | VFG0454 | Protein | 4e-169 | 45 |
