Gene Information

Name : UMNK88_1094 (UMNK88_1094)
Accession : YP_006132880.1
Strain : Escherichia coli UMNK88
Genome accession: NC_017641
Putative virulence/resistance : Virulence
Product : chaperone protein FocC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1098532 - 1099206 bp
Length : 675 bp
Strand : +
Note : -

DNA sequence : 
GTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATCCGCATGGGCGGCAGGTAAAGGCGGGATTGGACTTGCAGC
AACACGTCTTGTTTATTCAGAAGGTGAAGAGCAAATTTCACTGGGTGTACGTAACACCAGTCCGGATGTTCCTTATCTTA
TTCAGTCATGGGTGATGACCCCAGATAATAAAAAATCAGCAGACTTTATTATTACACCACTGCTATTTGTGCTGAATCCG
GCAAATGAGAATCTGTTACGCATTATGTACATTGGAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGCGT
ACGGGCAGTCCCTTCAACAACGAAGCGGGAAGAGGGAAATACCCTGAAGATTGCCACACAAAGCGTCATCAAACTTTTCT
GGCGACCAAAAGGTTTAGCGTATCCCTTAGCCGAGGCTCCGGCGAAACTGCGTTGCACTTCGTCAGCTGACATGGTTACG
GTCAGTAACCCAACACCTTATTTCATTACCCTGACAGACCTGAAAATAGGTGGAAAGGTAGTTAAAAATCAAATGATTTC
CCCCTTTGATAAATACCAATTCTCTCTGCCAAAGGGTGCCAAAAATAGCAGCGTAACGTATCGAACCATCAATGACTACG
GGGCGGAAACGCCGCAACTCAACTGTAAATCGTAA

Protein sequence : 
MTVSLTAILLSCSSAWAAGKGGIGLAATRLVYSEGEEQISLGVRNTSPDVPYLIQSWVMTPDNKKSADFIITPLLFVLNP
ANENLLRIMYIGAPLAKDRETLFFTSVRAVPSTTKREEGNTLKIATQSVIKLFWRPKGLAYPLAEAPAKLRCTSSADMVT
VSNPTPYFITLTDLKIGGKVVKNQMISPFDKYQFSLPKGAKNSSVTYRTINDYGAETPQLNCKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 2e-37 44
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 3e-36 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMNK88_1094 YP_006132880.1 chaperone protein FocC VFG0911 Protein 1e-36 44
UMNK88_1094 YP_006132880.1 chaperone protein FocC VFG1644 Protein 1e-36 44
UMNK88_1094 YP_006132880.1 chaperone protein FocC VFG0875 Protein 2e-37 44
UMNK88_1094 YP_006132880.1 chaperone protein FocC VFG0445 Protein 1e-36 42